RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 PHLPP2Q6ZVD8 1323 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 TRAV6A0A075B6T7 132 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 NPIPB15A6NHN6 443 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 ZSCAN5BA6NJL1 495 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 H3BUI4 141 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 MAPK13O15264 365 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 PHGDHO43175 533 aaKnown RBP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 TSPAN9O75954 239 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 SLITRK3O94933 977 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 METTL18O95568 372 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 DIRAS3O95661 229 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 ADH1BP00325 375 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 F9P00740 461 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 UBL4AP11441 157 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 PDE6AP16499 860 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 TYMPP19971 482 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 CASTP20810 708 aaKnown RBP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 TPP2P29144 1249 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 LSP1P33241 339 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 EVX2Q03828 476 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 DOC2AQ14183 400 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 LRRC14Q15048 493 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 ZSCAN26Q16670 478 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 NHSL2Q5HYW2 709 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 CORO6Q6QEF8 472 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 ADGRD1Q6QNK2 874 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 ATG14Q6ZNE5 492 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 BBS12Q6ZW61 710 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 NIPA2Q8N8Q9 360 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 BAHD1Q8TBE0 780 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 NRG4Q8WWG1 115 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 RGMAQ96B86 450 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 DHX58Q96C10 678 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 LTB4R2Q9NPC1 389 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 SERINC1Q9NRX5 453 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 CLEC4AQ9UMR7 237 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 R3HDM2Q9Y2K5 976 aaKnown RBP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 KCNK7Q9Y2U2 307 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 NPATQ14207 1427 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 SPATA31E1Q6ZUB1 1445 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 LRRIQ4A6NIV6 560 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 KPNA7A9QM74 516 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 SOCS6O14544 535 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 FLOT1O75955 427 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 ACTL6BO94805 426 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 SERPINC1P01008 464 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 ANXA1P04083 346 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 TK1P04183 234 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 POTEJP0CG39 1038 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 PTPRAP18433 802 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 JAK1P23458 1154 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 RFC4P35249 363 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 CTSOP43234 321 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 PTPN5P54829 565 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 HDAC4P56524 1084 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 PPATQ06203 517 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 SCRN1Q12765 414 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 CHIT1Q13231 466 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 PUM1Q14671 1186 aaKnown RBP eCLIP6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 PAN2Q504Q3 1202 aaKnown RBP6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 TMEM201Q5SNT2 666 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 CAPRIN2Q6IMN6 1127 aaKnown RBP6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 PPIL6Q8IXY8 311 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 KRT222Q8N1A0 295 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 FAM181AQ8N9Y4 354 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 FANCBQ8NB91 859 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 IQCDQ96DY2 449 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 SPACA9Q96E40 222 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 NAF1Q96HR8 494 aaKnown RBP6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 FAM111AQ96PZ2 611 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 GCNAQ96QF7 691 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 CTAGE1Q96RT6 745 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 P2RX7Q99572 595 aaKnown RBP6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 RIOK1Q9BRS2 568 aaKnown RBP6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 HTATIP2Q9BUP3 242 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 GBP3Q9H0R5 595 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 RASSF4Q9H2L5 321 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 ZFYVE1Q9HBF4 777 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 SMURF1Q9HCE7 757 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 MAGEE1Q9HCI5 957 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 SH3BP4Q9P0V3 963 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 MINPP1Q9UNW1 487 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 CCL27Q9Y4X3 112 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 SIGLEC1Q9BZZ2 1709 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 MPOP05164 745 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 GAAP10253 952 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 PSMA4P25789 261 aaKnown RBP6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 MYL6P60660 151 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 IRF9Q00978 393 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 RALGDSQ12967 914 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 PAK1Q13153 545 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 MDH1BQ5I0G3 518 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 ANGEL2Q5VTE6 544 aaKnown RBP6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 FAM111BQ6SJ93 734 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 KLHL24Q6TFL4 600 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 PET117Q6UWS5 81 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 DSG4Q86SJ6 1040 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 TLK2Q86UE8 772 aa6.61□□□□□ -1.35
TRAPPC11-209ENST00000512476 OSTM1Q86WC4 334 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms