RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 SERPINB12Q96P63 405 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 PLEKHA5Q9HAU0 1116 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 FAM8A1Q9UBU6 413 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 FOCADQ5VW36 1801 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 TSPAN3O60637 253 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 TAF6P49848 677 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 GEMIN4P57678 1058 aaKnown RBP12.4□□□□□ -0.42
PRDM16-207ENST00000512462 THOC5Q13769 683 aaKnown RBP12.4□□□□□ -0.42
PRDM16-207ENST00000512462 KBTBD12Q3ZCT8 623 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 C3orf20Q8ND61 904 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 SKA2Q8WVK7 121 aaPredicted RBP12.4□□□□□ -0.42
PRDM16-207ENST00000512462 KAT2BQ92831 832 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 PARK7Q99497 189 aaKnown RBP12.4□□□□□ -0.42
PRDM16-207ENST00000512462 MRPL45Q9BRJ2 306 aaKnown RBP12.4□□□□□ -0.42
PRDM16-207ENST00000512462 CNPY3Q9BT09 278 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 GPR88Q9GZN0 384 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 SARS2Q9NP81 518 aaKnown RBP12.4□□□□□ -0.42
PRDM16-207ENST00000512462 KRT82Q9NSB4 513 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 TXLNGQ9NUQ3 528 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 BFARQ9NZS9 450 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 BARX2Q9UMQ3 279 aaPredicted RBP12.4□□□□□ -0.42
PRDM16-207ENST00000512462 RPS6KL1Q9Y6S9 549 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 ERBB2P04626 1255 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 CPB1P15086 417 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 KCNA3P22001 575 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 KDELR1P24390 212 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 CYP2F1P24903 491 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 RPL22P35268 128 aaKnown RBP12.4□□□□□ -0.42
PRDM16-207ENST00000512462 OR1G1P47890 313 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 ACVR2BQ13705 512 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 CHI3L2Q15782 390 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 CTU1Q7Z7A3 348 aaKnown RBP12.4□□□□□ -0.42
PRDM16-207ENST00000512462 TLK2Q86UE8 772 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 LRRC6Q86X45 466 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 ADGRF2Q8IZF7 708 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 DEFB106AQ8N104 65 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 LMO3Q8TAP4 145 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 CHUKO15111 745 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 PLA2G6O60733 806 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 FAM155BO75949 473 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 ENDOD1O94919 500 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 ATXN8OSP0DMR3 200 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 MMP8P22894 467 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 BTBD8Q5XKL5 378 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 CYB5D1Q6P9G0 228 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 TAS1R3Q7RTX0 852 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 RASGEF1CQ8N431 466 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 EIF2AQ9BY44 585 aaKnown RBP12.39□□□□□ -0.43
PRDM16-207ENST00000512462 PCYOX1Q9UHG3 505 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 SYNPO2Q9UMS6 1093 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 C2orf71A6NGG8 1288 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 PPEF2O14830 753 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 FSCN2O14926 492 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 LIASO43766 372 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 DGKIO75912 1065 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 GARSP41250 739 aaKnown RBP12.39□□□□□ -0.43
PRDM16-207ENST00000512462 FAAP100Q0VG06 881 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 ANKRD22Q5VYY1 191 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 KCNT2Q6UVM3 1135 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 MTDHQ86UE4 582 aaKnown RBP12.39□□□□□ -0.43
PRDM16-207ENST00000512462 CDKL3Q8IVW4 592 aaPredicted RBP12.39□□□□□ -0.43
PRDM16-207ENST00000512462 CYP4X1Q8N118 509 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 LGMNQ99538 433 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 AVENQ9NQS1 362 aaPredicted RBP12.39□□□□□ -0.43
PRDM16-207ENST00000512462 GTSE1Q9NYZ3 720 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 RBPJLQ9UBG7 517 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 GDF10P55107 478 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 TSTA3Q13630 321 aaPredicted RBP12.39□□□□□ -0.43
PRDM16-207ENST00000512462 PRPSAP1Q14558 356 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 ZNF484Q5JVG2 852 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 SLFN11Q7Z7L1 901 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 CLEC4CQ8WTT0 213 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 HDAC11Q96DB2 347 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 NUDCD1Q96RS6 583 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 TRIM56Q9BRZ2 755 aaKnown RBP12.39□□□□□ -0.43
PRDM16-207ENST00000512462 ROPN1BQ9BZX4 212 aaPredicted RBP12.39□□□□□ -0.43
PRDM16-207ENST00000512462 ELOVL4Q9GZR5 314 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 ROPN1Q9HAT0 212 aaPredicted RBP12.39□□□□□ -0.43
PRDM16-207ENST00000512462 GRHL1Q9NZI5 618 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 HEY2Q9UBP5 337 aa12.39□□□□□ -0.43
PRDM16-207ENST00000512462 URB1O60287 2271 aaKnown RBP12.39□□□□□ -0.43
PRDM16-207ENST00000512462 NRXN2Q9P2S2 1712 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 LRCH4O75427 683 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 GPC4O75487 556 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 JCHAINP01591 159 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 MLH1P40692 756 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 PEX5P50542 639 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 TKTL1P51854 596 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 RAD23BP54727 409 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 SKOR1P84550 965 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 RPS6KA2Q15349 733 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 TSNAXIP1Q2TAA8 658 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 FASTKD1Q53R41 847 aaKnown RBP12.38□□□□□ -0.43
PRDM16-207ENST00000512462 SDHAF4Q5VUM1 108 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 WSCD1Q658N2 575 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 ISLR2Q6UXK2 745 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 SYDE1Q6ZW31 735 aaPredicted RBP12.38□□□□□ -0.43
PRDM16-207ENST00000512462 HERPUD2Q9BSE4 406 aa12.38□□□□□ -0.43
PRDM16-207ENST00000512462 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.38□□□□□ -0.43
PRDM16-207ENST00000512462 LRFN2Q9ULH4 789 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms