RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 TEKT4Q8WW24 435 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 ART4Q93070 314 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 NKD2Q969F2 451 aaPredicted RBP13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 EXOC4Q96A65 974 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 UROC1Q96N76 676 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 ZIM3Q96PE6 472 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 TBCBQ99426 244 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 FOXP3Q9BZS1 431 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 NEUROG2Q9H2A3 272 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 ST7Q9NRC1 585 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 TJP2Q9UDY2 1190 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 PADI3Q9ULW8 664 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 NOD1Q9Y239 953 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 NME7Q9Y5B8 376 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 C3orf70A6NLC5 250 aaPredicted RBP13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 ZNF487B1APH4 448 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 CYB561D2O14569 222 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 XPO1O14980 1071 aaKnown RBP13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 TRUB2O95900 331 aaKnown RBP13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 CTSHP09668 335 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 ATXN8OSP0DMR3 200 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 FGFR1P11362 822 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 KCNA5P22460 613 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 GJC1P36383 396 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 HSD17B3P37058 310 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 PTPN9P43378 593 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 RPL21P46778 160 aaKnown RBP13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 EIF3BP55884 814 aaKnown RBP13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 PDE4CQ08493 712 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 GLIPR1L2Q4G1C9 344 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 BOLA3Q53S33 107 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 ZFYVE27Q5T4F4 411 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 PMF1Q6P1K2 205 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 BBS12Q6ZW61 710 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 SLC26A9Q7LBE3 791 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 OTOP2Q7RTS6 562 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 ARFGAP1Q8N6T3 406 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 SLC43A3Q8NBI5 491 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 GSTCDQ8NEC7 633 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 C1orf54Q8WWF1 131 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 ARNTL2Q8WYA1 636 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 RNF25Q96BH1 459 aaPredicted RBP13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 SNF8Q96H20 258 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 GLT1D1Q96MS3 346 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 HERPUD2Q9BSE4 406 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 PLEKHA4Q9H4M7 779 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 AGO3Q9H9G7 860 aaKnown RBP13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 ALG13Q9NP73 1137 aaKnown RBP13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 IL23AQ9NPF7 189 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 CHST7Q9NS84 486 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 SNX24Q9Y343 169 aa13.73□□□□□ -0.21
DEPDC1B-206ENST00000512452 TECTAO75443 2155 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 LRRD1A4D1F6 860 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 ARL5CA6NH57 179 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 POLR3GO15318 223 aaPredicted RBP13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 LIASO43766 372 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 TCF4P15884 667 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 PDGFRAP16234 1089 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 MIPP30301 263 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 MLH1P40692 756 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 KCNJ1P48048 391 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 PLCB3Q01970 1234 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 DHX9Q08211 1270 aaKnown RBP13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 GRIK3Q13003 919 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 LPIN1Q14693 890 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 PDK2Q15119 407 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 PUS10Q3MIT2 529 aaKnown RBP13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 DAB2IPQ5VWQ8 1189 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 AGMOQ6ZNB7 445 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 B3GALNT2Q8NCR0 500 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 RXFP2Q8WXD0 754 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 PIK3R5Q8WYR1 880 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 KCTD13Q8WZ19 329 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 RAPGEF5Q92565 580 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 ZFP42Q96MM3 310 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 GAD1Q99259 594 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 HEMGNQ9BXL5 484 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 TRIM31Q9BZY9 425 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 DPEP3Q9H4B8 488 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 RSAD1Q9HA92 442 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 FAM49BQ9NUQ9 324 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 VPS18Q9P253 973 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 RALYQ9UKM9 306 aaKnown RBP13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 DSEQ9UL01 958 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 USP18Q9UMW8 372 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 R3HDM2Q9Y2K5 976 aaKnown RBP13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 FAN1Q9Y2M0 1017 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 NEU2Q9Y3R4 380 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 SLC4A7Q9Y6M7 1214 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 CACNA1HO95180 2353 aa13.72□□□□□ -0.21
DEPDC1B-206ENST00000512452 A0A1W2PQ45 241 aaPredicted RBP13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 A0A1W2PQY0 241 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 GOLGA6L10A6NI86 522 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 A6NNZ2 444 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 H0Y858 1186 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 PAPSS1O43252 624 aaPredicted RBP13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 PRPSAP2O60256 369 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 ENDOD1O94919 500 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 ITGAVP06756 1048 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 CA3P07451 260 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms