RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 CAPRIN2Q6IMN6 1127 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 PDXDC1Q6P996 788 aa3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 TMEM171Q8WVE6 324 aa3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 PPP2R3CQ969Q6 453 aa3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 WBP1Q96G27 269 aa3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 KAZALD1Q96I82 304 aa3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 CCDC8Q9H0W5 538 aaPredicted RBP3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 GBA2Q9HCG7 927 aaPredicted RBP3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 SARS2Q9NP81 518 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 NOP58Q9Y2X3 529 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 A0A087WWL8 130 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 ZNF814B7Z6K7 855 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 MYO1CO00159 1063 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 SPTLC2O15270 562 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 SPRY2O43597 315 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 TLX3O43711 291 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 IL6STP40189 918 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 PRKAG1P54619 331 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 PTCHD3Q3KNS1 767 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 DCAF12L1Q5VU92 463 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 CUZD1Q86UP6 607 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 C16orf71Q8IYS4 520 aaPredicted RBP3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 ANKRD13AQ8IZ07 590 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 ZCRB1Q8TBF4 217 aaKnown RBP3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 BPIFB1Q8TDL5 484 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 BCAS4Q8TDM0 211 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 HS6ST2Q96MM7 605 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 MGAT4CQ9UBM8 478 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 COL4A3BPQ9Y5P4 624 aa3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.53□□□□□ -1.84
SCAMP1-204ENST00000511551 TNKSO95271 1327 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 CLIC1O00299 241 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 ACOT8O14734 319 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 CTIFO43310 598 aaKnown RBP3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 TMPRSS11DO60235 418 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 EPN2O95208 641 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 CD63P08962 238 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 CREB1P16220 341 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 TACR3P29371 465 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 SLC14A1Q13336 389 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 FAM110CQ1W6H9 321 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 PGS1Q32NB8 556 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 PLA1AQ53H76 456 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 COL23A1Q86Y22 540 aaPredicted RBP3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 CELF5Q8N6W0 485 aaKnown RBP3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 DNAJC5GQ8N7S2 189 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 ASB5Q8WWX0 329 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 EDC3Q96F86 508 aaKnown RBP3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 CDK5RAP3Q96JB5 506 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 MRGPRX1Q96LB2 322 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 TRIM5Q9C035 493 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 ARHGAP39Q9C0H5 1083 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 TRIM36Q9NQ86 728 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 USP22Q9UPT9 525 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 ATP8A1Q9Y2Q0 1164 aa3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 TRIP12Q14669 1992 aaPredicted RBP3.52□□□□□ -1.85
SCAMP1-204ENST00000511551 C2CD4BA6NLJ0 364 aa3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 IGKV3-20P01619 116 aa3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 FGF3P11487 239 aaPredicted RBP3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 IBSPP21815 317 aaPredicted RBP3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 CDC25AP30304 524 aa3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 ARRB2P32121 409 aa3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 ALDH7A1P49419 539 aaKnown RBP3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 TIRAPP58753 221 aa3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 IGBP1P78318 339 aa3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 ITKQ08881 620 aa3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 MFSD13AQ14CX5 517 aa3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 CC2D1BQ5T0F9 858 aaKnown RBP3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 FOXP4Q8IVH2 680 aaPredicted RBP3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 SLC15A4Q8N697 577 aa3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 C12orf76Q8N812 135 aaPredicted RBP3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 HIC2Q96JB3 615 aa3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 LMLNQ96KR4 655 aa3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 VN1R3Q9BXE9 311 aa3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 TMEM45AQ9NWC5 275 aa3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 PCDHA12Q9UN75 941 aa3.51□□□□□ -1.85
SCAMP1-204ENST00000511551 NTN3O00634 580 aaPredicted RBP3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 HOXB2P14652 356 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 TBXAS1P24557 533 aaPredicted RBP3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 EPHA3P29320 983 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 PRKAR1BP31321 381 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 UQCRC1P31930 480 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 GUCY2FP51841 1108 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 TIAL1Q01085 375 aaKnown RBP eCLIP3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 PTPN21Q16825 1174 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 PRTGQ2VWP7 1150 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 FAM57BQ71RH2 274 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 B4GALNT4Q76KP1 1039 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 TMPRSS12Q86WS5 348 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 IQCF1Q8N6M8 205 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 WFIKKN2Q8TEU8 576 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 STAG1Q8WVM7 1258 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 WDYHV1Q96HA8 205 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 NTPCRQ9BSD7 190 aaKnown RBP3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 TUBB6Q9BUF5 446 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 XPNPEP3Q9NQH7 507 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 DECR2Q9NUI1 292 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 SEMA5BQ9P283 1151 aa3.5□□□□□ -1.85
SCAMP1-204ENST00000511551 hCG_2014768A0A024R1R8 64 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 PPM1GO15355 546 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms