RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 MAFAQ8NHW3 353 aaPredicted RBP6.14□□□□□ -1.43
NUP54-209ENST00000510569 MAP4K1Q92918 833 aa6.14□□□□□ -1.43
NUP54-209ENST00000510569 MTMR4Q9NYA4 1195 aa6.14□□□□□ -1.43
NUP54-209ENST00000510569 L1RE1Q9UN81 338 aa6.14□□□□□ -1.43
NUP54-209ENST00000510569 ADAM10O14672 748 aa6.13□□□□□ -1.43
NUP54-209ENST00000510569 INSIG1O15503 277 aa6.13□□□□□ -1.43
NUP54-209ENST00000510569 U2AF1L5P0DN76 240 aaPredicted RBP6.13□□□□□ -1.43
NUP54-209ENST00000510569 CREB1P16220 341 aa6.13□□□□□ -1.43
NUP54-209ENST00000510569 ATF7P17544 494 aaPredicted RBP6.13□□□□□ -1.43
NUP54-209ENST00000510569 PTDSS1P48651 473 aaKnown RBP6.13□□□□□ -1.43
NUP54-209ENST00000510569 SUMO3P55854 103 aaPredicted RBP6.13□□□□□ -1.43
NUP54-209ENST00000510569 U2AF1Q01081 240 aaKnown RBP eCLIP6.13□□□□□ -1.43
NUP54-209ENST00000510569 CFHR1Q03591 330 aa6.13□□□□□ -1.43
NUP54-209ENST00000510569 CNN3Q15417 329 aaKnown RBP6.13□□□□□ -1.43
NUP54-209ENST00000510569 RBMS2Q15434 407 aaKnown RBP6.13□□□□□ -1.43
NUP54-209ENST00000510569 SEC23BQ15437 767 aa6.13□□□□□ -1.43
NUP54-209ENST00000510569 NPY5RQ15761 445 aa6.13□□□□□ -1.43
NUP54-209ENST00000510569 TMEM65Q6PI78 240 aa6.13□□□□□ -1.43
NUP54-209ENST00000510569 DCDC5Q6ZRR9 648 aa6.13□□□□□ -1.43
NUP54-209ENST00000510569 PIP4P1Q86T03 277 aa6.13□□□□□ -1.43
NUP54-209ENST00000510569 VCPIP1Q96JH7 1222 aa6.13□□□□□ -1.43
NUP54-209ENST00000510569 SIGLEC11Q96RL6 698 aa6.13□□□□□ -1.43
NUP54-209ENST00000510569 CPNE7Q9UBL6 633 aa6.13□□□□□ -1.43
NUP54-209ENST00000510569 AFF4Q9UHB7 1163 aaKnown RBP6.13□□□□□ -1.43
NUP54-209ENST00000510569 H7C4K7 107 aa6.12□□□□□ -1.43
NUP54-209ENST00000510569 CNOT3O75175 753 aaKnown RBP6.12□□□□□ -1.43
NUP54-209ENST00000510569 PRF1P14222 555 aa6.12□□□□□ -1.43
NUP54-209ENST00000510569 HOXD9P28356 352 aaPredicted RBP6.12□□□□□ -1.43
NUP54-209ENST00000510569 TTC3P53804 2025 aa6.12□□□□□ -1.43
NUP54-209ENST00000510569 IGBP1P78318 339 aa6.12□□□□□ -1.43
NUP54-209ENST00000510569 ARHGEF7Q14155 803 aa6.12□□□□□ -1.43
NUP54-209ENST00000510569 ZNF750Q32MQ0 723 aa6.12□□□□□ -1.43
NUP54-209ENST00000510569 TMTC4Q5T4D3 741 aa6.12□□□□□ -1.43
NUP54-209ENST00000510569 IRF2BP2Q7Z5L9 587 aa6.12□□□□□ -1.43
NUP54-209ENST00000510569 RIMKLBQ9ULI2 386 aa6.12□□□□□ -1.43
NUP54-209ENST00000510569 THRAP3Q9Y2W1 955 aaKnown RBP6.12□□□□□ -1.43
NUP54-209ENST00000510569 MYMKA6NI61 221 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 A8MVJ9 347 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 RGS10O43665 173 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 TMEM191BP0C7N4 346 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 HGFP14210 728 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 MCM5P33992 734 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 LINC00205P59089 165 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 CFHR3Q02985 330 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 RAPGEF1Q13905 1077 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 KCNB1Q14721 858 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 ANO7Q6IWH7 933 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 VSTM1Q6UX27 236 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 CRELD2Q6UXH1 353 aaPredicted RBP6.11□□□□□ -1.43
NUP54-209ENST00000510569 KAZALD1Q96I82 304 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 C1orf112Q9NSG2 853 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 SACM1LQ9NTJ5 587 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 PI4KBQ9UBF8 816 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 MGAT4CQ9UBM8 478 aa6.11□□□□□ -1.43
NUP54-209ENST00000510569 ZMYM2Q9UBW7 1377 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 CFAP69A5D8W1 941 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 AGPSO00116 658 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 EXOC5O00471 708 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 RASSF9O75901 435 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 PIAS2O75928 621 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 IL1R1P14778 569 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 BRAFP15056 766 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 ACVR2AP27037 513 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 GATMP50440 423 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 PGDP52209 483 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 CNGA2Q16280 664 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 TRIM71Q2Q1W2 868 aaKnown RBP6.1□□□□□ -1.43
NUP54-209ENST00000510569 FAM102BQ5T8I3 360 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 RANBP10Q6VN20 620 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 SAMD14Q8IZD0 417 aaPredicted RBP6.1□□□□□ -1.43
NUP54-209ENST00000510569 EDC3Q96F86 508 aaKnown RBP6.1□□□□□ -1.43
NUP54-209ENST00000510569 ZNF668Q96K58 619 aaPredicted RBP6.1□□□□□ -1.43
NUP54-209ENST00000510569 ZBTB45Q96K62 511 aaPredicted RBP6.1□□□□□ -1.43
NUP54-209ENST00000510569 FAM83DQ9H4H8 585 aa6.1□□□□□ -1.43
NUP54-209ENST00000510569 TLR2O60603 784 aa6.09□□□□□ -1.43
NUP54-209ENST00000510569 PARP1P09874 1014 aaKnown RBP6.09□□□□□ -1.43
NUP54-209ENST00000510569 RPS16P62249 146 aaKnown RBP6.09□□□□□ -1.43
NUP54-209ENST00000510569 IGFBPL1Q8WX77 278 aa6.09□□□□□ -1.43
NUP54-209ENST00000510569 HS6ST2Q96MM7 605 aa6.09□□□□□ -1.43
NUP54-209ENST00000510569 STK31Q9BXU1 1019 aa6.09□□□□□ -1.43
NUP54-209ENST00000510569 EBF3Q9H4W6 596 aa6.09□□□□□ -1.43
NUP54-209ENST00000510569 COL20A1Q9P218 1284 aa6.09□□□□□ -1.43
NUP54-209ENST00000510569 TPCN1Q9ULQ1 816 aa6.09□□□□□ -1.43
NUP54-209ENST00000510569 MAFFQ9ULX9 164 aa6.09□□□□□ -1.43
NUP54-209ENST00000510569 FAM90A10PA6NDY2 464 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 AQP7P3A6NL99 342 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 A6NNZ2 444 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 PRPF3O43395 683 aaKnown RBP6.08□□□□□ -1.44
NUP54-209ENST00000510569 SNHG28P0DPA3 235 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 TXNP10599 105 aaKnown RBP6.08□□□□□ -1.44
NUP54-209ENST00000510569 CPT1AP50416 773 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 ID2Q02363 134 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 ZNF91Q05481 1191 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 SLC29A2Q14542 456 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 ST3GAL2Q16842 350 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 MINDY4Q4G0A6 757 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 C3orf38Q5JPI3 329 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 ODR4Q5SWX8 454 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 NXNQ6DKJ4 435 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 ZDHHC17Q8IUH5 632 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms