RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 IGHV1OR15-9A0A0B4J2B8 117 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 TRIM24O15164 1050 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 HOXC11O43248 304 aaPredicted RBP16.99■□□□□ 0.31
CXCL1-202ENST00000509101 TACC1O75410 805 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 DLATP10515 647 aaKnown RBP16.99■□□□□ 0.31
CXCL1-202ENST00000509101 IRF1P10914 325 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 TNNC1P63316 161 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 ANO4Q32M45 955 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 RABEPKQ7Z6M1 372 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 MIB1Q86YT6 1006 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 SLC41A1Q8IVJ1 513 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 NUP93Q8N1F7 819 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 HPS3Q969F9 1004 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 HSPA12BQ96MM6 686 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 B3GNT5Q9BYG0 378 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 CCSER2Q9H7U1 834 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 SPHK2Q9NRA0 654 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 DEC1Q9P2X7 70 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 HCN2Q9UL51 889 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 CYP8B1Q9UNU6 501 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.99■□□□□ 0.31
CXCL1-202ENST00000509101 SRPRBQ9Y5M8 271 aaKnown RBP16.99■□□□□ 0.31
CXCL1-202ENST00000509101 PLXNB3Q9ULL4 1909 aa16.99■□□□□ 0.31
CXCL1-202ENST00000509101 A0A087X0B3 334 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 TAF4O00268 1085 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 ARHGAP33O14559 1287 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 RTN3O95197 1032 aaPredicted RBP16.98■□□□□ 0.31
CXCL1-202ENST00000509101 CST3P01034 146 aaPredicted RBP16.98■□□□□ 0.31
CXCL1-202ENST00000509101 CD59P13987 128 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 NDUFV2P19404 249 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 NTSR1P30989 418 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 ZNF423Q2M1K9 1284 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 WDR72Q3MJ13 1102 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 EGFLAMQ63HQ2 1017 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 CCDC73Q6ZRK6 1079 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 RAB44Q7Z6P3 723 aaPredicted RBP16.98■□□□□ 0.31
CXCL1-202ENST00000509101 PROSER1Q86XN7 944 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 CCDC65Q8IXS2 484 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 B3GALNT2Q8NCR0 500 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 KCNV2Q8TDN2 545 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 OVCA2Q8WZ82 227 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 WBP2Q969T9 261 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 CAMK1GQ96NX5 476 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 PANK2Q9BZ23 570 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 PTPRBP23467 1997 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 IGSF10Q6WRI0 2623 aa16.98■□□□□ 0.31
CXCL1-202ENST00000509101 A0A1W2PQF6 199 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 A8MXQ7 604 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 TNNI1P19237 187 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 SLC5A3P53794 718 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 CEBPZQ03701 1054 aaKnown RBP16.97■□□□□ 0.31
CXCL1-202ENST00000509101 PREPLQ4J6C6 727 aaPredicted RBP16.97■□□□□ 0.31
CXCL1-202ENST00000509101 HECTD3Q5T447 861 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 STXBP4Q6ZWJ1 553 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 TMEM25Q86YD3 366 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 TRIML1Q8N9V2 468 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 RDH13Q8NBN7 331 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 SCAMP5Q8TAC9 235 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 KCNK16Q96T55 309 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 ACOX2Q99424 681 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 CGRRF1Q99675 332 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 CD93Q9NPY3 652 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 DNAJC17Q9NVM6 304 aaKnown RBP16.97■□□□□ 0.31
CXCL1-202ENST00000509101 DNAAF2Q9NVR5 837 aaKnown RBP16.97■□□□□ 0.31
CXCL1-202ENST00000509101 GMIPQ9P107 970 aa16.97■□□□□ 0.31
CXCL1-202ENST00000509101 CHORDC1Q9UHD1 332 aaPredicted RBP16.97■□□□□ 0.31
CXCL1-202ENST00000509101 ATP8B3O60423 1300 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 LOC400499M0QZD8 3231 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 A0A1W2PQD8 194 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 FAM221BA6H8Z2 402 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 SH3BP5O60239 455 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 SYPP08247 313 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 HNRNPDQ14103 355 aaKnown RBP16.96■□□□□ 0.31
CXCL1-202ENST00000509101 SNRNP35Q16560 246 aaKnown RBP16.96■□□□□ 0.31
CXCL1-202ENST00000509101 PLEKHG6Q3KR16 790 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 GRAMD4Q6IC98 578 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 FAM173BQ6P4H8 233 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 NUDT18Q6ZVK8 323 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 FAM35AQ86V20 835 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 CHPFQ8IZ52 775 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 RGL4Q8IZJ4 473 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 PDILTQ8N807 584 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 IPO4Q8TEX9 1081 aaKnown RBP16.96■□□□□ 0.31
CXCL1-202ENST00000509101 CCDC127Q96BQ5 260 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 MED10Q9BTT4 135 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 NACA2Q9H009 215 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 SLC6A17Q9H1V8 727 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 KIAA1586Q9HCI6 787 aa16.96■□□□□ 0.31
CXCL1-202ENST00000509101 NXF1Q9UBU9 619 aaKnown RBP16.96■□□□□ 0.31
CXCL1-202ENST00000509101 SMG1Q96Q15 3661 aaKnown RBP16.95■□□□□ 0.3
CXCL1-202ENST00000509101 GCN1Q92616 2671 aaKnown RBP16.95■□□□□ 0.3
CXCL1-202ENST00000509101 NEDD8-MDP1E9PL57 170 aa16.95■□□□□ 0.3
CXCL1-202ENST00000509101 ZBTB24O43167 697 aaPredicted RBP16.95■□□□□ 0.3
CXCL1-202ENST00000509101 ZNF217O75362 1048 aa16.95■□□□□ 0.3
CXCL1-202ENST00000509101 CLSTN1O94985 981 aa16.95■□□□□ 0.3
CXCL1-202ENST00000509101 FTH1P19P0C7X4 201 aa16.95■□□□□ 0.3
CXCL1-202ENST00000509101 HOXD13P35453 343 aa16.95■□□□□ 0.3
CXCL1-202ENST00000509101 SCAPQ12770 1279 aa16.95■□□□□ 0.3
CXCL1-202ENST00000509101 C19orf48Q6RUI8 117 aa16.95■□□□□ 0.3
CXCL1-202ENST00000509101 NAXDQ8IW45 347 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms