RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 EMC1Q8N766 993 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 NIPA2Q8N8Q9 360 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 TTC13Q8NBP0 860 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 SMG8Q8ND04 991 aaKnown RBP11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 BEST2Q8NFU1 509 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 JOSD2Q8TAC2 188 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 ZNF398Q8TD17 642 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 DENND1AQ8TEH3 1009 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 INPP5DQ92835 1189 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 SLITRK1Q96PX8 696 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 TMEM237Q96Q45 408 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 FAM118BQ9BPY3 351 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 MTG1Q9BT17 334 aaPredicted RBP11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 NT5C1AQ9BXI3 368 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 SAYSD1Q9NPB0 183 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 TSPAN16Q9UKR8 245 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 SCN10AQ9Y5Y9 1956 aa11.51□□□□□ -0.57
SH3RF1-203ENST00000508685 MEIS3P2A8K0S8 358 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 PI4K2BG5E9Z4 385 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 SEPT4O43236 478 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 RARBP10826 455 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 CCND3P30281 292 aaPredicted RBP11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 VPS41P49754 854 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 VCPP55072 806 aaKnown RBP11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 PSMC1P62191 440 aaKnown RBP11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 SP3Q02447 781 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 RNASELQ05823 741 aaKnown RBP11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 E2F5Q15329 346 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 TMED2Q15363 201 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 PDK4Q16654 411 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 TAF2Q6P1X5 1199 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 ACOT1Q86TX2 421 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 XYLT1Q86Y38 959 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 TNS4Q8IZW8 715 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 NME8Q8N427 588 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 MAB21L3Q8N8X9 362 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 N4BP2L2Q92802 583 aaPredicted RBP11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 ALKBH8Q96BT7 664 aaKnown RBP11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 C9orf72Q96LT7 481 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 ZFP42Q96MM3 310 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 LPIN3Q9BQK8 851 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 TRABDQ9H4I3 376 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 PCDH9Q9HC56 1237 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 METTL5Q9NRN9 209 aaKnown RBP11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 FAM49BQ9NUQ9 324 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 TBK1Q9UHD2 729 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 STRIP2Q9ULQ0 834 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 CDY2AQ9Y6F7 541 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 SPTLC1O15269 473 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 ADAMTS4O75173 837 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 ZWINTO95229 277 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 HMGCRP04035 888 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 KRT1P04264 644 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 VDRP11473 427 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 KRT3P12035 628 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 ARSEP51690 589 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 CCNG1P51959 295 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 KCNJ2P63252 427 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 MRPS6P82932 125 aaKnown RBP11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 SOWAHAQ2M3V2 549 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 TFDP3Q5H9I0 405 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 PPP1R26Q5T8A7 1209 aaPredicted RBP11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 SPOCD1Q6ZMY3 1216 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 POLNQ7Z5Q5 900 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 CTU1Q7Z7A3 348 aaKnown RBP11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 LRRC52Q8N7C0 313 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 CFAP61Q8NHU2 1237 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 PIWIL1Q96J94 861 aaKnown RBP11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 TUBB6Q9BUF5 446 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 DPEP3Q9H4B8 488 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 XPNPEP3Q9NQH7 507 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 DNAJC17Q9NVM6 304 aaKnown RBP11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 C15orf41Q9Y2V0 281 aa11.5□□□□□ -0.57
SH3RF1-203ENST00000508685 E7ENQ6 273 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 ANP32DO95626 131 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 ASGR1P07306 291 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 PRKAR2AP13861 404 aaKnown RBP11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 KRT15P19012 456 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 WDR4P57081 412 aaKnown RBP11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 GPS1Q13098 491 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 FBXO47Q5MNV8 452 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 ZFYVE27Q5T4F4 411 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 ZNF618Q5T7W0 954 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 ARFGAP1Q8N6T3 406 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 LRRC8CQ8TDW0 803 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 TBC1D31Q96DN5 1066 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 LRRC37BQ96QE4 947 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 UPF3AQ9H1J1 476 aaKnown RBP11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 LRMDAQ9H2I8 198 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 SPC25Q9HBM1 224 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 PSMC3IPQ9P2W1 217 aaPredicted RBP11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 CACNG4Q9UBN1 327 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 DNPEPQ9ULA0 475 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 PHTF1Q9UMS5 762 aa11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 UBQLN1Q9UMX0 589 aaKnown RBP11.49□□□□□ -0.57
SH3RF1-203ENST00000508685 SIGLEC16A6NMB1 481 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 E5RJQ4 531 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 PIRO00625 290 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 KPNA6O60684 536 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 CHRNA1P02708 482 aa11.48□□□□□ -0.57
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