RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, human

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-208	ENST00000506971	POLR3A	O14802	1390 aa	Predicted RBP	4.99	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	MED14	O60244	1454 aa		4.99	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	NKTR	P30414	1462 aa	Known RBP	4.99	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	SHPRH	Q149N8	1683 aa		4.99	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	ADGRA2	Q96PE1	1338 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	NPAT	Q14207	1427 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	NEXMIF	Q5QGS0	1516 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	DYTN	A2CJ06	578 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	NT5C1B-RDH14	C9J2C7	533 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971		E7ENX8	843 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971		F5H423	210 aa	Predicted RBP	4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	C1QL1	O75973	258 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	CHEK2	O96017	543 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	ZFX	P17010	805 aa	Predicted RBP	4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	HSPA6	P17066	643 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	GCLC	P48506	637 aa	Predicted RBP	4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	MAP2K6	P52564	334 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	TAP2	Q03519	686 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	TBX2	Q13207	712 aa	Predicted RBP	4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	PGS1	Q32NB8	556 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	LVRN	Q6Q4G3	990 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	TMEM108	Q6UXF1	575 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	USP45	Q70EL2	814 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	KRT77	Q7Z794	578 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	MYLK4	Q86YV6	388 aa	Predicted RBP	4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	ACRBP	Q8NEB7	543 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	POC1B	Q8TC44	478 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	FAM136A	Q96C01	138 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	ERP27	Q96DN0	273 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	CDK5RAP3	Q96JB5	506 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	ALG13	Q9NP73	1137 aa	Known RBP	4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	PNPO	Q9NVS9	261 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	CLIC5	Q9NZA1	410 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	EHD3	Q9NZN3	535 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	SH3BP4	Q9P0V3	963 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	RNF7	Q9UBF6	113 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	DDX20	Q9UHI6	824 aa	Known RBP	4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	ENTPD2	Q9Y5L3	495 aa		4.98	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	AGL	P35573	1532 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	ADGRB2	O60241	1585 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	SMIM22	K7EJ46	135 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	PPM1D	O15297	605 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	PROM1	O43490	865 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	RBMXL2	O75526	392 aa	Known RBP	4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	FTH1P19	P0C7X4	201 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	RHCE	P18577	417 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	PPP2R1A	P30153	589 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	TM4SF4	P48230	202 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	ALDH9A1	P49189	494 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	FXR1	P51114	621 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	ALDH5A1	P51649	535 aa	Predicted RBP	4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	PDE1A	P54750	535 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	RHD	Q02161	417 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	PDCD2	Q16342	344 aa	Predicted RBP	4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	KHDC1L	Q5JSQ8	128 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	VPS53	Q5VIR6	699 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	KIAA0895L	Q68EN5	471 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	RINL	Q6ZS11	566 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	SRGAP1	Q7Z6B7	1085 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	PPP1R3B	Q86XI6	285 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	AFAP1	Q8N556	730 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	NGDN	Q8NEJ9	315 aa	Known RBP	4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	PARD3B	Q8TEW8	1205 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	POF1B	Q8WVV4	589 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	LRGUK	Q96M69	825 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	SLC46A1	Q96NT5	459 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	AMBRA1	Q9C0C7	1298 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	TRMT13	Q9NUP7	481 aa	Known RBP	4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	RLIM	Q9NVW2	624 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	ETAA1	Q9NY74	926 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	NOL7	Q9UMY1	257 aa	Known RBP	4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	PCDHA6	Q9UN73	950 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	KIF20B	Q96Q89	1820 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	SIGLEC1	Q9BZZ2	1709 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	TMEM131L	A2VDJ0	1609 aa		4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.97	□□□□□ -1.61
CALCOCO2-208	ENST00000506971	PRSS47	A8MTI9	375 aa		4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	QSOX1	O00391	747 aa		4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	SLC16A6	O15403	523 aa		4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	ZKSCAN1	P17029	563 aa	Predicted RBP	4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	HK3	P52790	923 aa		4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	EIF5	P55010	431 aa	Known RBP	4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	GPSM2	P81274	684 aa		4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	PDE1C	Q14123	709 aa	Predicted RBP	4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	KIF22	Q14807	665 aa		4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	LONRF1	Q17RB8	773 aa		4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	CCDC96	Q2M329	555 aa		4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	SUGP1	Q8IWZ8	645 aa	Known RBP	4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	CLASRP	Q8N2M8	674 aa	Known RBP	4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	SPATA5	Q8NB90	893 aa		4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	FANCB	Q8NB91	859 aa		4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	IL17RE	Q8NFR9	667 aa		4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	KLHDC4	Q8TBB5	520 aa		4.96	□□□□□ -1.62
CALCOCO2-208	ENST00000506971	BRIX1	Q8TDN6	353 aa	Known RBP	4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms