RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 DDX1Q92499 740 aaKnown RBP19.12■□□□□ 0.65
NPHP4-210ENST00000506941 TRMT61BQ9BVS5 477 aaKnown RBP19.12■□□□□ 0.65
NPHP4-210ENST00000506941 KIF9Q9HAQ2 790 aa19.12■□□□□ 0.65
NPHP4-210ENST00000506941 LRRC4Q9HBW1 653 aa19.12■□□□□ 0.65
NPHP4-210ENST00000506941 ARHGAP26Q9UNA1 814 aa19.12■□□□□ 0.65
NPHP4-210ENST00000506941 A0A1W2PQC6 194 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 FAM86C2PA6NEL3 165 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 TLR5O60602 858 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 LCP1P13796 627 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 GDI1P31150 447 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 RPL34P49207 117 aaKnown RBP19.11■□□□□ 0.65
NPHP4-210ENST00000506941 PDE6CP51160 858 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 BPIFB4P59827 614 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 ZNF77Q15935 545 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 WDTC1Q8N5D0 677 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 BPIFB1Q8TDL5 484 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 EPS8L1Q8TE68 723 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 CLEC4CQ8WTT0 213 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 ZFYVE19Q96K21 471 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 ZFRQ96KR1 1074 aaKnown RBP19.11■□□□□ 0.65
NPHP4-210ENST00000506941 SPAG5Q96R06 1193 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 CYLDQ9NQC7 956 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.11■□□□□ 0.65
NPHP4-210ENST00000506941 NAGPAQ9UK23 515 aa19.11■□□□□ 0.65
NPHP4-210ENST00000506941 ARNTLO00327 626 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 TBX18O95935 607 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 PBX1P40424 430 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 UBASH3AP57075 661 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 DAOAP59103 153 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 TAF3Q5VWG9 929 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 SIX6OS1Q8N1H7 587 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 SCML4Q8N228 414 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 SH3RF2Q8TEC5 729 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 SLC20A1Q8WUM9 679 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 HSFY1Q96LI6 401 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 SLC4A5Q9BY07 1137 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 BRD9Q9H8M2 597 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 SMPD4Q9NXE4 827 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 IFNKQ9P0W0 207 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 NOCTQ9UK39 431 aaKnown RBP19.1■□□□□ 0.65
NPHP4-210ENST00000506941 NUDT5Q9UKK9 219 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 CPQQ9Y646 472 aa19.1■□□□□ 0.65
NPHP4-210ENST00000506941 TMEM221A6NGB7 291 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 YJEFN3A6XGL0 299 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 E7ENQ6 273 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 M0R296 226 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 MBL2P11226 248 aaPredicted RBP19.09■□□□□ 0.65
NPHP4-210ENST00000506941 RARGP13631 454 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 TCF3P15923 654 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 KRT9P35527 623 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 STAT1P42224 750 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 PSEN1P49768 467 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 YWHAGP61981 247 aaKnown RBP eCLIP19.09■□□□□ 0.65
NPHP4-210ENST00000506941 PDCLQ13371 301 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 HFE2Q6ZVN8 426 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 C1orf131Q8NDD1 294 aaKnown RBP19.09■□□□□ 0.65
NPHP4-210ENST00000506941 TTC16Q8NEE8 873 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 STK32AQ8WU08 396 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 BAP1Q92560 729 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 TTYH3Q9C0H2 523 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 LHX5Q9H2C1 402 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 CNGB3Q9NQW8 809 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 ST7Q9NRC1 585 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 CLIC5Q9NZA1 410 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 TJP2Q9UDY2 1190 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 CA14Q9ULX7 337 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 KIAA1549LQ6ZVL6 1849 aa19.09■□□□□ 0.65
NPHP4-210ENST00000506941 F5P12259 2224 aa19.08■□□□□ 0.65
NPHP4-210ENST00000506941 KRBA1A5PL33 1030 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 E5RJQ4 531 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 LEFTY2O00292 366 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 ZNF263O14978 683 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 MDM4O15151 490 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 CHADO15335 359 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 PDGFBP01127 241 aaPredicted RBP19.08■□□□□ 0.64
NPHP4-210ENST00000506941 MMEP08473 750 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 MTF1Q14872 753 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 CACNA2D4Q7Z3S7 1137 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 YAF2Q8IY57 180 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 ZNF276Q8N554 614 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 WBP2Q969T9 261 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 CPXM1Q96SM3 734 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 WNT16Q9UBV4 365 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 FBXL21Q9UKT6 434 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 ZDBF2Q9HCK1 2354 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 ZNF318Q5VUA4 2279 aa19.08■□□□□ 0.64
NPHP4-210ENST00000506941 WDFY4Q6ZS81 3184 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 PAPSS1O43252 624 aaPredicted RBP19.07■□□□□ 0.64
NPHP4-210ENST00000506941 CHRNB2P17787 502 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 TNK2Q07912 1038 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 ARHGAP29Q52LW3 1261 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 C10orf120Q5SQS8 335 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 TMEM110Q86TL2 294 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 SCUBE3Q8IX30 993 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 SIX5Q8N196 739 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 ARHGAP18Q8N392 663 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 DNASE1L2Q92874 299 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 IRF7Q92985 503 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 FAM83CQ9BQN1 747 aa19.07■□□□□ 0.64
NPHP4-210ENST00000506941 XPO4Q9C0E2 1151 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms