RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 ATAT1Q5SQI0 421 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 OR6B2Q6IFH4 312 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 CES5AQ6NT32 575 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 FAM183BPQ6ZVS7 135 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 PDZD4Q76G19 769 aaPredicted RBP9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 ERICH1Q86X53 443 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 CNGA4Q8IV77 575 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 SIX6OS1Q8N1H7 587 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 SMRP1Q8NCR6 262 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 CMASQ8NFW8 434 aaPredicted RBP9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 EDEM1Q92611 657 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 ZDHHC16Q969W1 377 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 MYADMQ96S97 322 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 PACSIN1Q9BY11 444 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 SYNCQ9H7C4 482 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 CCSER2Q9H7U1 834 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 NHEJ1Q9H9Q4 299 aaPredicted RBP9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 TRPC7Q9HCX4 862 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 ASAH2Q9NR71 780 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 ZNHIT6Q9NWK9 470 aaKnown RBP9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 HSFX1Q9UBD0 423 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 MAFFQ9ULX9 164 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 C2orf16Q68DN1 1984 aa9.29□□□□□ -0.92
SCAMP1-202ENST00000506858 ZNF840PA6NDX5 716 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 ZNF263O14978 683 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 C1RP00736 705 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 FTLP02792 175 aaPredicted RBP9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 CCDC172P0C7W6 258 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 FSHRP23945 695 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 HOXA9P31269 272 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 CDH5P33151 784 aaPredicted RBP9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 PTP4A2Q12974 167 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 CAMK2BQ13554 666 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 MEA1Q16626 185 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 ASTE1Q2TB18 679 aaPredicted RBP9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 PRSS36Q5K4E3 855 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 ACAD10Q6JQN1 1059 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 ELMSAN1Q6PJG2 1045 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 ADGRD1Q6QNK2 874 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 RAD9BQ6WBX8 426 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 TMEM110Q86TL2 294 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 ITIH5Q86UX2 942 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 ZNF677Q86XU0 584 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 MAB21L3Q8N8X9 362 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 KCTD13Q8WZ19 329 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 IQCDQ96DY2 449 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 TTLL2Q9BWV7 592 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 SLC46A2Q9BY10 475 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 RNF38Q9H0F5 515 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 NUCKS1Q9H1E3 243 aaKnown RBP9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 WDR6Q9NNW5 1121 aaKnown RBP9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 IL37Q9NZH6 218 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 DPP7Q9UHL4 492 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 ASB3Q9Y575 518 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 CEP83Q9Y592 693 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 USP3Q9Y6I4 520 aa9.28□□□□□ -0.92
SCAMP1-202ENST00000506858 A0A0U1RQJ8 604 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 AKR1B10O60218 316 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 ZBED1O96006 694 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 FYNP06241 537 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 ABCB4P21439 1286 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 RPL34P49207 117 aaKnown RBP9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 DAOAP59103 153 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 PITX1P78337 314 aaPredicted RBP9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 CCDC122Q5T0U0 273 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 GPR158Q5T848 1215 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 PTCRAQ6ISU1 281 aaPredicted RBP9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 XYLT1Q86Y38 959 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 TMEM139Q8IV31 216 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 ARL14EPQ8N8R7 260 aaPredicted RBP9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 ADAM32Q8TC27 787 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 ATRIPQ8WXE1 791 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 SUSD6Q92537 303 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 WBP2Q969T9 261 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 C18orf8Q96DM3 657 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 RPGRIP1Q96KN7 1286 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 HSFY1Q96LI6 401 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 MYRFLQ96LU7 910 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 PANX2Q96RD6 677 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 KCNK17Q96T54 332 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 UBXN6Q9BZV1 441 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 DEF6Q9H4E7 631 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 SLITRK6Q9H5Y7 841 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 ADAM22Q9P0K1 906 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 IMPACTQ9P2X3 320 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 MYO1AQ9UBC5 1043 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 NAGPAQ9UK23 515 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 NAALADL1Q9UQQ1 740 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 SCML2Q9UQR0 700 aa9.27□□□□□ -0.92
SCAMP1-202ENST00000506858 TTC28Q96AY4 2481 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 CLUHO75153 1309 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 GREB1Q4ZG55 1949 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 ZNF638Q14966 1978 aaKnown RBP9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 RTN3O95197 1032 aaPredicted RBP9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 LSM8O95777 96 aaKnown RBP9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 TFE3P19532 575 aaPredicted RBP9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 MMP8P22894 467 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 RRM1P23921 792 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 GBP2P32456 591 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms