RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 UBR7Q8N806 425 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 SLC4A11Q8NBS3 891 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 TTC16Q8NEE8 873 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 TATDN2Q93075 761 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 EXOC4Q96A65 974 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 CEP63Q96MT8 703 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 ARID3AQ99856 593 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 FBXO44Q9H4M3 255 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 CYLDQ9NQC7 956 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 CISHQ9NSE2 258 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 SMPD4Q9NXE4 827 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 CFAP97Q9P2B7 532 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 ARMCX3Q9UH62 379 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 SMG5Q9UPR3 1016 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 SCML2Q9UQR0 700 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 CACNA1AO00555 2505 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 ATG2BQ96BY7 2078 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 CCDC163A0A0D9SF12 145 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 HRO43593 1189 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 GREM1O60565 184 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 TLR5O60602 858 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 RNF40O75150 1001 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 TRIM21P19474 475 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 CNR2P34972 360 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 FNTBP49356 437 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 KIF11P52732 1056 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 CAMK2BQ13554 666 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 STIM1Q13586 685 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 DHCR24Q15392 516 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 DCAF17Q5H9S7 520 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 TCERG1LQ5VWI1 586 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 ARHGAP17Q68EM7 881 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 ISM2Q6H9L7 571 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 RHBDF2Q6PJF5 856 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 WDR5BQ86VZ2 330 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 LONP2Q86WA8 852 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 ZNF276Q8N554 614 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 DCLK2Q8N568 766 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 WBP2Q969T9 261 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 OTUB2Q96DC9 234 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 TMEM176AQ96HP8 235 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 DUSP16Q9BY84 665 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 METTL14Q9HCE5 456 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 TLR8Q9NR97 1041 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 OSER1Q9NX31 292 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 TBC1D14Q9P2M4 693 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 FARP1Q9Y4F1 1045 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 USP3Q9Y6I4 520 aa9.58□□□□□ -0.88
PDLIM5-209ENST00000506632 MYOFQ9NZM1 2061 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 A0A0A0MRY4 1105 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 SCAMP3O14828 347 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 CYP26A1O43174 497 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 ATG13O75143 517 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 ACO1P21399 889 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 TGM1P22735 817 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 EIF2DP41214 584 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 FMO5P49326 533 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 MESP2Q0VG99 397 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 CUL2Q13617 745 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 ZNF394Q53GI3 561 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 RAB41Q5JT25 222 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 KLHDC10Q6PID8 442 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 SYT13Q7L8C5 426 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 CCDC186Q7Z3E2 898 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 SCD5Q86SK9 330 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 PHTF2Q8N3S3 785 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 CAMKK1Q8N5S9 505 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 LMO3Q8TAP4 145 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 NELFBQ8WX92 580 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 JAKMIP2Q96AA8 810 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 HEXIM2Q96MH2 286 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 KLF16Q9BXK1 252 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 UBXN6Q9BZV1 441 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 DNAI2Q9GZS0 605 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 NMUR1Q9HB89 426 aa9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.57□□□□□ -0.88
PDLIM5-209ENST00000506632 EML5Q05BV3 1969 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 ANTXRLA6NF34 631 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 K7EQS6 105 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 P4HA2O15460 535 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 HOXC11O43248 304 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 TBX18O95935 607 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 ADH1CP00326 375 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 ADH5P11766 374 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 ATP5C1P36542 298 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 MLLT3P42568 568 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 MARSP56192 900 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 SRSF5Q13243 272 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 LY6G5CQ5SRR4 150 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 HEATR6Q6AI08 1181 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 LAIR1Q6GTX8 287 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 KLHL10Q6JEL2 608 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 HTR3DQ70Z44 454 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 C12orf40Q86WS4 652 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 TTC30AQ86WT1 665 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 TRIM59Q8IWR1 403 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 BBS7Q8IWZ6 715 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 ETFBKMTQ8IXQ9 262 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 KIAA2013Q8IYS2 634 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 ANKRD52Q8NB46 1076 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms