RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 ZWILCHQ9H900 591 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 TMLHEQ9NVH6 421 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 MTRRQ9UBK8 725 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 INSL6Q9Y581 213 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 VWA8A3KMH1 1905 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 FAM187AA6NFU0 413 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 ZNF487B1APH4 448 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 USP17L7P0C7H9 530 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 RALAP11233 206 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 CYP2F1P24903 491 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 GBP1P32455 592 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 FNTAP49354 379 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 TUFMP49411 452 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 GLUD2P49448 558 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 SULT1E1P49888 294 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 AIF1P55008 147 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 ARPP19P56211 112 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 TFDP2Q14188 446 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 KRT81Q14533 505 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 NAA30Q147X3 362 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 C15orf59Q2T9L4 293 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 SPOCD1Q6ZMY3 1216 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 DDX53Q86TM3 631 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 IFT20Q8IY31 132 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 C7orf61Q8IZ16 206 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 NUP93Q8N1F7 819 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 FBXO22Q8NEZ5 403 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 CMASQ8NFW8 434 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 PHOSPHO2Q8TCD6 241 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 CLEC4CQ8WTT0 213 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 ANKRD7Q92527 254 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 CENPIQ92674 756 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 KHSRPQ92945 711 aaKnown RBP eCLIP12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 PIWIL1Q96J94 861 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 PARD6BQ9BYG5 372 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 RAB17Q9H0T7 212 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 PRDM16Q9HAZ2 1276 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 RC3H2Q9HBD1 1191 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 STIM2Q9P246 746 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 HSFX1Q9UBD0 423 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 PCSK1NQ9UHG2 260 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 MAFFQ9ULX9 164 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 USP3Q9Y6I4 520 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 SLC4A7Q9Y6M7 1214 aa12.56□□□□□ -0.4
POLR2J3-211ENST00000506060 PATJQ8NI35 1801 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 NLRC5Q86WI3 1866 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 CCDC151A5D8V7 595 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 MDM4O15151 490 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 TBC1D4O60343 1298 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 GJB5O95377 273 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 OR4Q2P0C623 313 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 KDELR1P24390 212 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 RDXP35241 583 aaKnown RBP12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 PBX3P40426 434 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 PSEN1P49768 467 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 NDUFV1P49821 464 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 SLC5A3P53794 718 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 DSG1Q02413 1049 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 DEUP1Q05D60 604 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 TAF5Q15542 800 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 CYP1B1Q16678 543 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 ARL13BQ3SXY8 428 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 RTP2Q5QGT7 225 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 ERMARDQ5T6L9 678 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 DAB2IPQ5VWQ8 1189 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 BTBD8Q5XKL5 378 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 TPGS2Q68CL5 300 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 SLC8B1Q6J4K2 584 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 SYDE1Q6ZW31 735 aaPredicted RBP12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 ADAT2Q7Z6V5 191 aaKnown RBP12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 C12orf50Q8NA57 414 aaPredicted RBP12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 HERVK_113Q902F9 699 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 HSPH1Q92598 858 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 SPATA17Q96L03 361 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 LRRC1Q9BTT6 524 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 RHOBTB2Q9BYZ6 727 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 ANKZF1Q9H8Y5 726 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 CHST7Q9NS84 486 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 ABCC13Q9NSE7 274 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 HCSTQ9UBK5 93 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 RAB21Q9UL25 225 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 UTP11Q9Y3A2 253 aaKnown RBP12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 RWDD3Q9Y3V2 267 aa12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 MRPL42Q9Y6G3 142 aaKnown RBP12.55□□□□□ -0.4
POLR2J3-211ENST00000506060 hCG_1818297A0A087WSY0 165 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 MTMR11A4FU01 709 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 PI4K2BG5E9Z4 385 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 M0QYT0 321 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 ENDOD1O94919 500 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 EFEMP2O95967 443 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 GAS8O95995 478 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 RARAP10276 462 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 HAPLN1P10915 354 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 NCAM1P13591 858 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 ZFXP17010 805 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 CDKN2BP42772 138 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 ZNF135P52742 658 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 CACNA2D1P54289 1103 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms