RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 SPRED3Q2MJR0 410 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 FNBP1LQ5T0N5 605 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 RNASEH2BQ5TBB1 312 aaKnown RBP10.13□□□□□ -0.79
CSF1R-203ENST00000504875 GPR142Q7Z601 462 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 FAM228AQ86W67 206 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 CCDC110Q8TBZ0 833 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 CKAP2Q8WWK9 683 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 CPT1BQ92523 772 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 SPOCK2Q92563 424 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 PRCCQ92733 491 aaPredicted RBP10.13□□□□□ -0.79
CSF1R-203ENST00000504875 FERMT1Q9BQL6 677 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 GOLGA2P5Q9HBQ8 144 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 ABLIM1O14639 778 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 SMPD1P17405 629 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 ACAT1P24752 427 aaKnown RBP10.13□□□□□ -0.79
CSF1R-203ENST00000504875 RPA3P35244 121 aaPredicted RBP10.13□□□□□ -0.79
CSF1R-203ENST00000504875 MPP2Q14168 576 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 DPYSL3Q14195 570 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 PMF1Q6P1K2 205 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 PLEKHH3Q7Z736 793 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 FAM131BQ86XD5 332 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 RIBC1Q8N443 379 aaPredicted RBP10.13□□□□□ -0.79
CSF1R-203ENST00000504875 NKD2Q969F2 451 aaPredicted RBP10.13□□□□□ -0.79
CSF1R-203ENST00000504875 PPP1R12CQ9BZL4 782 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 SLC13A1Q9BZW2 595 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 C12orf65Q9H3J6 166 aaKnown RBP10.13□□□□□ -0.79
CSF1R-203ENST00000504875 SLCO1B3Q9NPD5 702 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 TTLL3Q9Y4R7 772 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 DNAJC25-GNG10A0A024R161 153 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 A0A0G2JND7 137 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 TCRBV7S3A2A0A539 114 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 IQCA1LA6NCM1 817 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 XPOTO43592 962 aaKnown RBP10.13□□□□□ -0.79
CSF1R-203ENST00000504875 ATP6V1G2O95670 118 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 CTSHP09668 335 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 TROVE2P10155 538 aaKnown RBP eCLIP10.13□□□□□ -0.79
CSF1R-203ENST00000504875 PROZP22891 400 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 RBL1P28749 1068 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 GJA5P36382 358 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 GTF2A2P52657 109 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 BEX3Q00994 111 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 SLC25A11Q02978 314 aaKnown RBP10.13□□□□□ -0.79
CSF1R-203ENST00000504875 OVGP1Q12889 678 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 PTK7Q13308 1070 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 ITIH4Q14624 930 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 OASLQ15646 514 aaKnown RBP10.13□□□□□ -0.79
CSF1R-203ENST00000504875 DCAF4L1Q3SXM0 396 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 SLC27A1Q6PCB7 646 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 TTC39CQ8N584 583 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 C2orf69Q8N8R5 385 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 RNF34Q969K3 372 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 MAGEB18Q96M61 343 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 CYTH2Q99418 400 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 TINF2Q9BSI4 451 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 BCO2Q9BYV7 579 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 ABHD16BQ9H3Z7 469 aa10.13□□□□□ -0.79
CSF1R-203ENST00000504875 NOP53Q9NZM5 478 aaKnown RBP10.13□□□□□ -0.79
CSF1R-203ENST00000504875 IQANK1A0A1B0GTG1 560 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 KBTBD13C9JR72 458 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 M0QZ92 97 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 LPXNO60711 386 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 TAF11Q15544 211 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 BOLA3Q53S33 107 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 SIX6OS1Q8N1H7 587 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 UBR7Q8N806 425 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 APPL2Q8NEU8 664 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 SYT17Q9BSW7 474 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 NPHS2Q9NP85 383 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 PIH1D1Q9NWS0 290 aaKnown RBP10.12□□□□□ -0.79
CSF1R-203ENST00000504875 TXNDC16Q9P2K2 825 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 ZC3H7BQ9UGR2 993 aaKnown RBP10.12□□□□□ -0.79
CSF1R-203ENST00000504875 PHTF1Q9UMS5 762 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 SMG5Q9UPR3 1016 aaKnown RBP10.12□□□□□ -0.79
CSF1R-203ENST00000504875 C5orf60A6NFR6 353 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 ALOX15BO15296 676 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 STRNO43815 780 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 CELF2O95319 508 aaKnown RBP10.12□□□□□ -0.79
CSF1R-203ENST00000504875 MMP3P08254 477 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 STIP1P31948 543 aaKnown RBP10.12□□□□□ -0.79
CSF1R-203ENST00000504875 STILQ15468 1287 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 DCAF6Q58WW2 860 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 TAPT1Q6NXT6 567 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 TRABD2AQ86V40 505 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 VPS52Q8N1B4 723 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 B4GALNT2Q8NHY0 566 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 SLC35B2Q8TB61 432 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 ERP27Q96DN0 273 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 PARK7Q99497 189 aaKnown RBP10.12□□□□□ -0.79
CSF1R-203ENST00000504875 SNRNP25Q9BV90 132 aaKnown RBP10.12□□□□□ -0.79
CSF1R-203ENST00000504875 CEP41Q9BYV8 373 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 KDM4CQ9H3R0 1056 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 DPEP3Q9H4B8 488 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 C2CD2Q9Y426 696 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 ATXN1P54253 815 aaKnown RBP10.12□□□□□ -0.79
CSF1R-203ENST00000504875 ZNF200P98182 395 aaPredicted RBP10.12□□□□□ -0.79
CSF1R-203ENST00000504875 AP1B1Q10567 949 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 FBXO47Q5MNV8 452 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 HEATR6Q6AI08 1181 aaKnown RBP10.12□□□□□ -0.79
CSF1R-203ENST00000504875 C6orf89Q6UWU4 347 aa10.12□□□□□ -0.79
CSF1R-203ENST00000504875 TRIM74Q86UV6 250 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms