RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 RTP3Q9BQQ7 232 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 DNAI2Q9GZS0 605 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 MAN1C1Q9NR34 630 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.73□□□□□ -0.69
USP17L28-201ENST00000504543 OGFRQ9NZT2 677 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 CDH9Q9ULB4 789 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.73□□□□□ -0.69
USP17L28-201ENST00000504543 WDR27A2RRH5 827 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 TMEM110-MUSTN1A8MSY1 372 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 BHMG1C9JSJ3 638 aaPredicted RBP10.72□□□□□ -0.69
USP17L28-201ENST00000504543 KRIT1O00522 736 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 ADAM12O43184 909 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 SEC31AO94979 1220 aaKnown RBP10.72□□□□□ -0.69
USP17L28-201ENST00000504543 FGGP02679 453 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 VDRP11473 427 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 BMP1P13497 986 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 RPL17P18621 184 aaKnown RBP10.72□□□□□ -0.69
USP17L28-201ENST00000504543 ELF1P32519 619 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 RWDD2BP57060 319 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 TSPY1Q01534 308 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 PLD1Q13393 1074 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 FAM171BQ6P995 826 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.72□□□□□ -0.69
USP17L28-201ENST00000504543 TMEM130Q8N3G9 435 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 TFAP2BQ92481 460 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 KRT35Q92764 455 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 RIPOR3Q96MK2 946 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 PKMYT1Q99640 499 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 FUT8Q9BYC5 575 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 PRKD2Q9BZL6 878 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 ELOVL4Q9GZR5 314 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 GDF3Q9NR23 364 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 WDR35Q9P2L0 1181 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 DMGDHQ9UI17 866 aaKnown RBP10.72□□□□□ -0.69
USP17L28-201ENST00000504543 TIMM13Q9Y5L4 95 aaPredicted RBP10.72□□□□□ -0.69
USP17L28-201ENST00000504543 PATJQ8NI35 1801 aa10.72□□□□□ -0.69
USP17L28-201ENST00000504543 PTPRDP23468 1912 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 O00370 1275 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 MAP2K7O14733 419 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 XYLBO75191 536 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 HEXIM1O94992 359 aaKnown RBP10.71□□□□□ -0.69
USP17L28-201ENST00000504543 CD19P15391 556 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 GNL1P36915 607 aaPredicted RBP10.71□□□□□ -0.69
USP17L28-201ENST00000504543 MARCKSL1P49006 195 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 TUFMP49411 452 aaKnown RBP10.71□□□□□ -0.69
USP17L28-201ENST00000504543 NNTQ13423 1086 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 CNGA2Q16280 664 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 ZNF394Q53GI3 561 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 SGO2Q562F6 1265 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 INTS6LQ5JSJ4 861 aaKnown RBP10.71□□□□□ -0.69
USP17L28-201ENST00000504543 TJAP1Q5JTD0 557 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 ATAT1Q5SQI0 421 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 PPP1R15BQ5SWA1 713 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 DNAJC24Q6P3W2 148 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 CCNI2Q6ZMN8 369 aaPredicted RBP10.71□□□□□ -0.69
USP17L28-201ENST00000504543 HDXQ7Z353 690 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 ERICH1Q86X53 443 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 IFT20Q8IY31 132 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 CRYBG2Q8N1P7 616 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 NIPA2Q8N8Q9 360 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 LEMD2Q8NC56 503 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 OR10T2Q8NGX3 314 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 FEZF2Q8TBJ5 459 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 FNIP1Q8TF40 1166 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 AENQ8WTP8 325 aaKnown RBP10.71□□□□□ -0.69
USP17L28-201ENST00000504543 BTBD6Q96KE9 485 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 RUNDC3BQ96NL0 473 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 TWNKQ96RR1 684 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 KRT12Q99456 494 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 NT5C1AQ9BXI3 368 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 MIS12Q9H081 205 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 VIPAS39Q9H9C1 493 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 DDX43Q9NXZ2 648 aaKnown RBP10.71□□□□□ -0.69
USP17L28-201ENST00000504543 HMGXB4Q9UGU5 601 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 IP6K2Q9UHH9 426 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 USTQ9Y2C2 406 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.71□□□□□ -0.69
USP17L28-201ENST00000504543 ASB3Q9Y575 518 aa10.71□□□□□ -0.69
USP17L28-201ENST00000504543 MTMR11A4FU01 709 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 TMEM191CA6NGB0 347 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 RAD51CO43502 376 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 MICAL2O94851 1124 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 C8AP07357 584 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 SETSIPP0DME0 302 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 CPB1P15086 417 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 MAGEA11P43364 429 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 GABRB2P47870 512 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 NDST1P52848 882 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 CDH8P55286 799 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 CYP1B1Q16678 543 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 PTPN20Q4JDL3 420 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 PPM1LQ5SGD2 360 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 PTCRAQ6ISU1 281 aaPredicted RBP10.7□□□□□ -0.7
USP17L28-201ENST00000504543 EMBQ6PCB8 327 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 LCLAT1Q6UWP7 414 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 MAATS1Q7Z4T9 603 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 OSTM1Q86WC4 334 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 WDTC1Q8N5D0 677 aa10.7□□□□□ -0.7
USP17L28-201ENST00000504543 C12orf50Q8NA57 414 aaPredicted RBP10.7□□□□□ -0.7
USP17L28-201ENST00000504543 CCDC26Q8TAB7 109 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms