RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 SLC20A1Q8WUM9 679 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 MCRS1Q96EZ8 462 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 MRFAP1L1Q96HT8 127 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 SLC4A5Q9BY07 1137 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 CNGB3Q9NQW8 809 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 TLR8Q9NR97 1041 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 CHORDC1Q9UHD1 332 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 CYTH4Q9UIA0 394 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 CEP83Q9Y592 693 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 FBXO21O94952 628 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 LSM8O95777 96 aaKnown RBP12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 ZBED1O96006 694 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 SP100P23497 879 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 RGS7P49802 495 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 TUBP50607 506 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 CYP4F8P98187 520 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 FMO1Q01740 532 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 ADIGQ0VDE8 80 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 PDCLQ13371 301 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 ASIC2Q16515 512 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 STXBP5Q5T5C0 1151 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 TAF3Q5VWG9 929 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 TMEM110Q86TL2 294 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 PASD1Q8IV76 773 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 ZNF276Q8N554 614 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 CPLX3Q8WVH0 158 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 NXPE3Q969Y0 559 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 ZSWIM3Q96MP5 696 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 ASB16Q96NS5 453 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 NOX5Q96PH1 765 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 AGPAT1Q99943 283 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 SLC46A2Q9BY10 475 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 ULBP1Q9BZM6 244 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 PDCL3Q9H2J4 239 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 TRPV4Q9HBA0 871 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 GMIPQ9P107 970 aa12.52□□□□□ -0.41
PDLIM5-208ENST00000504489 ANHXE9PGG2 379 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 CYP1A1P04798 512 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 TPM1P09493 284 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 USP17L7P0C7H9 530 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 LCP1P13796 627 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 HNRNPH3P31942 346 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 CASP14P31944 242 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 SNX16P57768 344 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 DAOAP59103 153 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 NOMO3P69849 1222 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 TBX2Q13207 712 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 ARID5BQ14865 1188 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 E4F1Q66K89 784 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 TXNDC8Q6A555 127 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 MTSS1LQ765P7 747 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 BHLHA9Q7RTU4 235 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 SCD5Q86SK9 330 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 CMTM8Q8IZV2 173 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 SIX6OS1Q8N1H7 587 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 ARHGAP18Q8N392 663 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 MAB21L3Q8N8X9 362 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 ZSCAN18Q8TBC5 510 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 ADAMTS19Q8TE59 1207 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 IRGQQ8WZA9 623 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 PPP1R13BQ96KQ4 1090 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 SYT11Q9BT88 431 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 SLITRK6Q9H5Y7 841 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 ST7Q9NRC1 585 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 CLIC5Q9NZA1 410 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 LIMD1Q9UGP4 676 aa12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 BZW2Q9Y6E2 419 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-208ENST00000504489 TRAV19A0A0A6YYK7 116 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 A0A1W2PQH9 124 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 C2orf78A6NCI8 922 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 E5RJQ4 531 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 OLFM2O95897 454 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 ABL1P00519 1130 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 OAS1P00973 400 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 HDCP19113 662 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 PGFP49763 221 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 KLHL30Q0D2K2 578 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 HTR4Q13639 388 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 FAM78AQ5JUQ0 283 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 HECTD3Q5T447 861 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 TMC6Q7Z403 805 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 GPIHBP1Q8IV16 184 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 ARID3BQ8IVW6 561 aaPredicted RBP12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 DRC7Q8IY82 874 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 C1orf131Q8NDD1 294 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 OR8K1Q8NGG5 319 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 SMARCD2Q92925 531 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 E2F7Q96AV8 911 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 CPXM1Q96SM3 734 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 HAUS4Q9H6D7 363 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 NMUR1Q9HB89 426 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 IGSF9Q9P2J2 1179 aa12.5□□□□□ -0.41
PDLIM5-208ENST00000504489 COL4A2P08572 1712 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 PIK3R2O00459 728 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 PAPSS1O43252 624 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 SART1O43290 800 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 ECI2O75521 394 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 SERPING1P05155 500 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 RALAP11233 206 aa12.49□□□□□ -0.41
PDLIM5-208ENST00000504489 UNGP13051 313 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms