RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 CD58P19256 250 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 ADORA2BP29275 332 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 TUBP50607 506 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 FKBP3Q00688 224 aaKnown RBP12.64□□□□□ -0.39
MED28-203ENST00000503945 INCA1Q0VD86 236 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 DHCR24Q15392 516 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 SF3A2Q15428 464 aaKnown RBP12.64□□□□□ -0.39
MED28-203ENST00000503945 ST3GAL2Q16842 350 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 RHBDF2Q6PJF5 856 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 SYT13Q7L8C5 426 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 SMYD4Q8IYR2 804 aaPredicted RBP12.64□□□□□ -0.39
MED28-203ENST00000503945 FBXL13Q8NEE6 735 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 ENGASEQ8NFI3 743 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 RPLP0P6Q8NHW5 317 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 OTUB2Q96DC9 234 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 PNKPQ96T60 521 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 APOBEC3GQ9HC16 384 aaKnown RBP12.64□□□□□ -0.39
MED28-203ENST00000503945 FAM49BQ9NUQ9 324 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 POLR3BQ9NW08 1133 aaPredicted RBP12.64□□□□□ -0.39
MED28-203ENST00000503945 RAB20Q9NX57 234 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 PCDHA5Q9Y5H7 936 aa12.64□□□□□ -0.39
MED28-203ENST00000503945 FAM92AA1XBS5 289 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 ADH1CP00326 375 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 ZDHHC11BP0C7U3 371 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 CCDC192P0DO97 292 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 ATP5C1P36542 298 aaKnown RBP12.63□□□□□ -0.39
MED28-203ENST00000503945 STIM1Q13586 685 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 PREPLQ4J6C6 727 aaPredicted RBP12.63□□□□□ -0.39
MED28-203ENST00000503945 ZCWPW2Q504Y3 356 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 C2orf27AQ580R0 203 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 TCERG1LQ5VWI1 586 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 BTBD8Q5XKL5 378 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 ANKRD40Q6AI12 368 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 NUDT18Q6ZVK8 323 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 CACNA2D4Q7Z3S7 1137 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 KBTBD6Q86V97 674 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 ZMIZ2Q8NF64 920 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 GAB3Q8WWW8 586 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 DUSP16Q9BY84 665 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 NIF3L1Q9GZT8 377 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 CCSER2Q9H7U1 834 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 RXFP3Q9NSD7 469 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 GMIPQ9P107 970 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 SCML2Q9UQR0 700 aa12.63□□□□□ -0.39
MED28-203ENST00000503945 A0A0A0MRY4 1105 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 K7EQS6 105 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 TM4SF5O14894 197 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 FOXD2O60548 495 aaPredicted RBP12.62□□□□□ -0.39
MED28-203ENST00000503945 CILPO75339 1184 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 RPP40O75818 363 aaKnown RBP12.62□□□□□ -0.39
MED28-203ENST00000503945 ZNF806P0C7X5 589 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 ACO1P21399 889 aaKnown RBP12.62□□□□□ -0.39
MED28-203ENST00000503945 OPRD1P41143 372 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 SLC6A11P48066 632 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 MXI1P50539 228 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 SLC8A3P57103 927 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 GAD2Q05329 585 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 GOLGA8FQ08AF8 430 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 GOLGA8DPQ0D2H9 430 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 AASDHQ4L235 1098 aaPredicted RBP12.62□□□□□ -0.39
MED28-203ENST00000503945 ZNF394Q53GI3 561 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 COBLL1Q53SF7 1204 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 N4BP2L1Q5TBK1 243 aaPredicted RBP12.62□□□□□ -0.39
MED28-203ENST00000503945 NAIF1Q69YI7 327 aaPredicted RBP12.62□□□□□ -0.39
MED28-203ENST00000503945 IL31Q6EBC2 164 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 TADA2BQ86TJ2 420 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 ELOA2Q8IYF1 753 aaPredicted RBP12.62□□□□□ -0.39
MED28-203ENST00000503945 WHAMMQ8TF30 809 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 SEMA4DQ92854 862 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 ACDQ96AP0 544 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 TMEM176AQ96HP8 235 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 DHTKD1Q96HY7 919 aaPredicted RBP12.62□□□□□ -0.39
MED28-203ENST00000503945 LOXL4Q96JB6 756 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 TWNKQ96RR1 684 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 FAM124BQ9H5Z6 455 aaPredicted RBP12.62□□□□□ -0.39
MED28-203ENST00000503945 HMGXB4Q9UGU5 601 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 CHD8Q9HCK8 2581 aa12.62□□□□□ -0.39
MED28-203ENST00000503945 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.61□□□□□ -0.39
MED28-203ENST00000503945 SCAMP3O14828 347 aaKnown RBP12.61□□□□□ -0.39
MED28-203ENST00000503945 TLR5O60602 858 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 EPN2O95208 641 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 APBB3O95704 486 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 TBX18O95935 607 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 APODP05090 189 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 CYP17A1P05093 508 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 EIF2DP41214 584 aaKnown RBP12.61□□□□□ -0.39
MED28-203ENST00000503945 GRIA2P42262 883 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 TNFRSF4P43489 277 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 PLA2G4AP47712 749 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 PSEN1P49768 467 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 LIMK1P53667 647 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 SEC13P55735 322 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 MRPS21P82921 87 aaKnown RBP12.61□□□□□ -0.39
MED28-203ENST00000503945 LRRC63Q05C16 580 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 DMC1Q14565 340 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 ANO4Q32M45 955 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 LY6G5CQ5SRR4 150 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 ISM2Q6H9L7 571 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 CLEC20AQ6ZU45 233 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 HTR3DQ70Z44 454 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms