RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 SNX29Q8TEQ0 813 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 FBLIM1Q8WUP2 373 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ESR2Q92731 530 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 HNRNPABQ99729 332 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SPATC1LQ9H0A9 340 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF700Q9H0M5 742 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 DPH5Q9H2P9 285 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 MROH8Q9H579 483 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ECT2Q9H8V3 914 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 MRPL40Q9NQ50 206 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 FKBP14Q9NWM8 211 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 OGDHLQ9ULD0 1010 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 PPIEQ9UNP9 301 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 RTCBQ9Y3I0 505 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CLUHO75153 1309 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 HHLA1C9JL84 531 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 UBAP1LF5GYI3 381 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 AP1G1O43747 822 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 TSPAN19P0C672 248 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 BMP2P12643 396 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 CPA1P15085 419 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 TMOD1P28289 359 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF76P36508 570 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 FLT3P36888 993 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 MLH1P40692 756 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 CCNFP41002 786 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 RING1Q06587 406 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF33BQ06732 778 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 GIT2Q14161 759 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 MTFR1Q15390 333 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 SLC18A3Q16572 532 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 CCDC14Q49A88 953 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 TEDDM1Q5T9Z0 273 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 SFMBT2Q5VUG0 894 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 TRIM67Q6ZTA4 783 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 TMC3Q7Z5M5 1100 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 TMPRSS6Q8IU80 811 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 RHOT2Q8IXI1 618 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 TSEN2Q8NCE0 465 aaKnown RBP2.9□□□□□ -1.94
NEDD4-204ENST00000503468 FAM13CQ8NE31 585 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 ATL1Q8WXF7 558 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 B3GNT4Q9C0J1 378 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 TBC1D22BQ9NU19 505 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 SEPT10Q9P0V9 454 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 SNX9Q9Y5X1 595 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 PIEZO1Q92508 2521 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 GOLGA8QA0A0J9YX86 632 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 GOLGA8OA6NCC3 632 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 GOLGA8CPA6NN73 597 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF839A8K0R7 811 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 GOLGA8NF8WBI6 632 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 H0YJX3 145 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 GOLGA8SH3BPF8 625 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 KRIT1O00522 736 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 GYG2O15488 501 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 TEX33O43247 280 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 PEX11AO75192 247 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 NDUFB10O96000 172 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 CLPTM1O96005 669 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 ZBED1O96006 694 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 KRT6AP02538 564 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 KRT6BP04259 564 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 ASLP04424 464 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 SERPING1P05155 500 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 HMOX2P30519 316 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 BMP8BP34820 402 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 TCF7P36402 384 aaPredicted RBP2.9□□□□□ -1.94
NEDD4-204ENST00000503468 BACE1P56817 501 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 ERVK-24P63145 666 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 CYP4A11Q02928 519 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 BCL2A1Q16548 175 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.9□□□□□ -1.94
NEDD4-204ENST00000503468 CYP4A22Q5TCH4 519 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 TCERG1LQ5VWI1 586 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 PPP4R4Q6NUP7 873 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 TTC27Q6P3X3 843 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 EXOC3L1Q86VI1 746 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 UBL4BQ8N7F7 174 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 FBXO15Q8NCQ5 510 aaPredicted RBP2.9□□□□□ -1.94
NEDD4-204ENST00000503468 ACMSDQ8TDX5 336 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 MTBPQ96DY7 904 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 EPSTI1Q96J88 318 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 SLC2A13Q96QE2 648 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 VPS16Q9H269 839 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 NHEJ1Q9H9Q4 299 aaPredicted RBP2.9□□□□□ -1.94
NEDD4-204ENST00000503468 OSGEPQ9NPF4 335 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 NLRC4Q9NPP4 1024 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 EIF2B3Q9NR50 452 aaKnown RBP2.9□□□□□ -1.94
NEDD4-204ENST00000503468 ASIC5Q9NY37 505 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF639Q9UID6 485 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 LNPEPQ9UIQ6 1025 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 DNAJC12Q9UKB3 198 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 KIAA1257Q9ULG3 409 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 AGTPBP1Q9UPW5 1226 aa2.9□□□□□ -1.94
NEDD4-204ENST00000503468 MTO1Q9Y2Z2 717 aaKnown RBP2.9□□□□□ -1.94
NEDD4-204ENST00000503468 TRBV5-3A0A0A0MS03 114 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 SLC15A5A6NIM6 579 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 LSM8O95777 96 aaKnown RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 BDNFP23560 247 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 MARCKSP29966 332 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms