RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 VITQ6UXI7 678 aa17.33■□□□□ 0.37
SCLT1-205ENST00000503401 IRF2BP2Q7Z5L9 587 aa17.33■□□□□ 0.37
SCLT1-205ENST00000503401 SCUBE3Q8IX30 993 aa17.33■□□□□ 0.37
SCLT1-205ENST00000503401 SLC44A3Q8N4M1 653 aa17.33■□□□□ 0.37
SCLT1-205ENST00000503401 USP13Q92995 863 aaPredicted RBP17.33■□□□□ 0.37
SCLT1-205ENST00000503401 CPXM1Q96SM3 734 aa17.33■□□□□ 0.37
SCLT1-205ENST00000503401 SLC4A5Q9BY07 1137 aa17.33■□□□□ 0.37
SCLT1-205ENST00000503401 SMPD4Q9NXE4 827 aa17.33■□□□□ 0.37
SCLT1-205ENST00000503401 IGSF9Q9P2J2 1179 aa17.33■□□□□ 0.37
SCLT1-205ENST00000503401 CEP83Q9Y592 693 aa17.33■□□□□ 0.37
SCLT1-205ENST00000503401 ITIH6Q6UXX5 1313 aa17.33■□□□□ 0.36
SCLT1-205ENST00000503401 YJEFN3A6XGL0 299 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 HEPACAM2A8MVW5 462 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 E7ENQ6 273 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 COCHO43405 550 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 TLR5O60602 858 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 FERP16591 822 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 YWHAGP61981 247 aaKnown RBP eCLIP17.32■□□□□ 0.36
SCLT1-205ENST00000503401 ZXDBP98169 803 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 ASIC2Q16515 512 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 SFMBT2Q5VUG0 894 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 HFE2Q6ZVN8 426 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 VSTM4Q8IW00 320 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 RIN3Q8TB24 985 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 STK32AQ8WU08 396 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 ELSPBP1Q96BH3 223 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 PPP1R13BQ96KQ4 1090 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 TRPV4Q9HBA0 871 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 CNGB3Q9NQW8 809 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 TDP1Q9NUW8 608 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 MYO6Q9UM54 1294 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 DPYSL4O14531 572 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 MDM4O15151 490 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 ECI2O75521 394 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 MBL2P11226 248 aaPredicted RBP17.32■□□□□ 0.36
SCLT1-205ENST00000503401 RARGP13631 454 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 CASP14P31944 242 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 RPL34P49207 117 aaKnown RBP17.32■□□□□ 0.36
SCLT1-205ENST00000503401 DAOAP59103 153 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 TDGQ13569 410 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 PTPN20Q4JDL3 420 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 NAA35Q5VZE5 725 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 SPECC1LQ69YQ0 1117 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 TMEM35BQ8NCS4 154 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 CPA5Q8WXQ8 436 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 PCDHB18PQ96TA0 734 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 EDEM3Q9BZQ6 932 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 SEPT11Q9NVA2 429 aaKnown RBP17.32■□□□□ 0.36
SCLT1-205ENST00000503401 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.32■□□□□ 0.36
SCLT1-205ENST00000503401 ZMYM5Q9UJ78 669 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 CAPN11Q9UMQ6 739 aa17.32■□□□□ 0.36
SCLT1-205ENST00000503401 A0A1W2PQJ5 194 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 SOBPA7XYQ1 873 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 PAPSS1O43252 624 aaPredicted RBP17.31■□□□□ 0.36
SCLT1-205ENST00000503401 OLFM2O95897 454 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 ERBB2P04626 1255 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 SKILP12757 684 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 ACADSBP45954 432 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 NOMO3P69849 1222 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 GOLGA8FQ08AF8 430 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 GOLGA8DPQ0D2H9 430 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 C2CD6Q53TS8 623 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 TMEM110Q86TL2 294 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 ZNF677Q86XU0 584 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 EDEM1Q92611 657 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 NXPE3Q969Y0 559 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 PIWIL1Q96J94 861 aaKnown RBP17.31■□□□□ 0.36
SCLT1-205ENST00000503401 NACA2Q9H009 215 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 CYLDQ9NQC7 956 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 AIPL1Q9NZN9 384 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 SORCS3Q9UPU3 1222 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.31■□□□□ 0.362e-6■■■■□ 19.3
SCLT1-205ENST00000503401 CPQQ9Y646 472 aa17.31■□□□□ 0.36
SCLT1-205ENST00000503401 SCAMP3O14828 347 aaKnown RBP17.3■□□□□ 0.36
SCLT1-205ENST00000503401 WEE1P30291 646 aa17.3■□□□□ 0.36
SCLT1-205ENST00000503401 CDH5P33151 784 aaPredicted RBP17.3■□□□□ 0.36
SCLT1-205ENST00000503401 TUBP50607 506 aa17.3■□□□□ 0.36
SCLT1-205ENST00000503401 C10orf120Q5SQS8 335 aa17.3■□□□□ 0.36
SCLT1-205ENST00000503401 BSPRYQ5W0U4 402 aa17.3■□□□□ 0.36
SCLT1-205ENST00000503401 CELF5Q8N6W0 485 aaKnown RBP17.3■□□□□ 0.36
SCLT1-205ENST00000503401 ZFYVE19Q96K21 471 aa17.3■□□□□ 0.36
SCLT1-205ENST00000503401 NOX5Q96PH1 765 aa17.3■□□□□ 0.36
SCLT1-205ENST00000503401 AGPAT1Q99943 283 aa17.3■□□□□ 0.36
SCLT1-205ENST00000503401 SYNCQ9H7C4 482 aa17.3■□□□□ 0.36
SCLT1-205ENST00000503401 LUC7L2Q9Y383 392 aaKnown RBP17.3■□□□□ 0.36
SCLT1-205ENST00000503401 TNFRSF10AO00220 468 aa17.29■□□□□ 0.36
SCLT1-205ENST00000503401 FBXO21O94952 628 aa17.29■□□□□ 0.36
SCLT1-205ENST00000503401 LSM8O95777 96 aaKnown RBP17.29■□□□□ 0.36
SCLT1-205ENST00000503401 CCDC172P0C7W6 258 aa17.29■□□□□ 0.36
SCLT1-205ENST00000503401 RALAP11233 206 aa17.29■□□□□ 0.36
SCLT1-205ENST00000503401 PSEN1P49768 467 aa17.29■□□□□ 0.36
SCLT1-205ENST00000503401 GPC5P78333 572 aa17.29■□□□□ 0.36
SCLT1-205ENST00000503401 SLC7A9P82251 487 aa17.29■□□□□ 0.36
SCLT1-205ENST00000503401 ZBED6P86452 979 aa17.29■□□□□ 0.36
SCLT1-205ENST00000503401 BTBD8Q5XKL5 378 aa17.29■□□□□ 0.36
SCLT1-205ENST00000503401 TMC6Q7Z403 805 aa17.29■□□□□ 0.36
SCLT1-205ENST00000503401 MFSD6LQ8IWD5 586 aa17.29■□□□□ 0.36
SCLT1-205ENST00000503401 ARHGAP18Q8N392 663 aa17.29■□□□□ 0.36
SCLT1-205ENST00000503401 ZNF397Q8NF99 534 aaPredicted RBP17.29■□□□□ 0.36
SCLT1-205ENST00000503401 SLC30A5Q8TAD4 765 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms