RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.18■□□□□ 0.34
SCLT1-204ENST00000503215 IMPG2Q9BZV3 1241 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 NMUR1Q9HB89 426 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 ZDHHC4Q9NPG8 344 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 COMMD8Q9NX08 183 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 NUDT5Q9UKK9 219 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 INVSQ9Y283 1065 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 MYO16Q9Y6X6 1858 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 MYH10P35580 1976 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 TRIM49BA6NDI0 452 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 SLC9A3R1O14745 358 aaPredicted RBP17.17■□□□□ 0.34
SCLT1-204ENST00000503215 MDM4O15151 490 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 CETN3O15182 167 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 GREM1O60565 184 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 TLR5O60602 858 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 GTF2H1P32780 548 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 ATXN1P54253 815 aaKnown RBP17.17■□□□□ 0.34
SCLT1-204ENST00000503215 ENPEPQ07075 957 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 CBWD6Q4V339 395 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 CBWD3Q5JTY5 395 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 CBWD5Q5RIA9 395 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 PPP1R26Q5T8A7 1209 aaPredicted RBP17.17■□□□□ 0.34
SCLT1-204ENST00000503215 ZNF658Q5TYW1 1059 aaPredicted RBP17.17■□□□□ 0.34
SCLT1-204ENST00000503215 KRT39Q6A163 491 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 GPR161Q8N6U8 529 aaKnown RBP17.17■□□□□ 0.34
SCLT1-204ENST00000503215 KIAA1958Q8N8K9 716 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 NAT16Q8N8M0 369 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 SPATA20Q8TB22 786 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 SEMA4GQ9NTN9 838 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 NCOR2Q9Y618 2525 aa17.17■□□□□ 0.34
SCLT1-204ENST00000503215 CCDC163A0A0D9SF12 145 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 A0A1W2PQH9 124 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 TRIM24O15164 1050 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 EPB41P11171 864 aaKnown RBP17.16■□□□□ 0.34
SCLT1-204ENST00000503215 ADH5P11766 374 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 ACO1P21399 889 aaKnown RBP17.16■□□□□ 0.34
SCLT1-204ENST00000503215 MXI1P50539 228 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 TUBP50607 506 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 LMNB2Q03252 620 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 KDSRQ06136 332 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 BECN1Q14457 450 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 SCD5Q86SK9 330 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 DDX42Q86XP3 938 aaKnown RBP eCLIP17.16■□□□□ 0.34
SCLT1-204ENST00000503215 TMEM25Q86YD3 366 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 ZC3H3Q8IXZ2 948 aaKnown RBP17.16■□□□□ 0.34
SCLT1-204ENST00000503215 PHTF2Q8N3S3 785 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 CAMKK1Q8N5S9 505 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 EXOC4Q96A65 974 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 HEXIM2Q96MH2 286 aaKnown RBP17.16■□□□□ 0.34
SCLT1-204ENST00000503215 KLF16Q9BXK1 252 aaPredicted RBP17.16■□□□□ 0.34
SCLT1-204ENST00000503215 FBXO44Q9H4M3 255 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 RAB20Q9NX57 234 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 SCML2Q9UQR0 700 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 EML5Q05BV3 1969 aa17.16■□□□□ 0.34
SCLT1-204ENST00000503215 DCDC2BA2VCK2 349 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 GOLGA6L4A6NEF3 574 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 GDF9O60383 454 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 KAT7O95251 611 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 APBB3O95704 486 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 CD44P16070 742 aaKnown RBP17.15■□□□□ 0.34
SCLT1-204ENST00000503215 KIF11P52732 1056 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 RAD23BP54727 409 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 NUCB2P80303 420 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 FOXK2Q01167 660 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 TMEM92Q6UXU6 159 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 CACNA2D4Q7Z3S7 1137 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 ALLCQ8N6M5 410 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 SLC4A11Q8NBS3 891 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 FBXL13Q8NEE6 735 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 GSDMAQ96QA5 445 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 PNKPQ96T60 521 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 DUSP16Q9BY84 665 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 NACA2Q9H009 215 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 ARRDC1-AS1Q9H2J1 176 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 SMOC1Q9H4F8 434 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 TLR8Q9NR97 1041 aaKnown RBP17.15■□□□□ 0.34
SCLT1-204ENST00000503215 CISHQ9NSE2 258 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 RMND1Q9NWS8 449 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 TBC1D14Q9P2M4 693 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 SH3BP1Q9Y3L3 701 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 KIAA1549LQ6ZVL6 1849 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 SPAG17Q6Q759 2223 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 ADH1CP00326 375 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 CCDC192P0DO97 292 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 TIE1P35590 1138 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 SF3A2Q15428 464 aaKnown RBP17.15■□□□□ 0.34
SCLT1-204ENST00000503215 CSRP2Q16527 193 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 COBLL1Q53SF7 1204 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 DCAF17Q5H9S7 520 aaPredicted RBP17.15■□□□□ 0.34
SCLT1-204ENST00000503215 PRR23CQ6ZRP0 262 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 ETFBKMTQ8IXQ9 262 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 SMARCE1Q969G3 411 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 ACDQ96AP0 544 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 P2RY11Q96G91 374 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 CYLDQ9NQC7 956 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 ARHGEF4Q9NR80 690 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 RXFP3Q9NSD7 469 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 MAN1B1Q9UKM7 699 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 HCN2Q9UL51 889 aa17.15■□□□□ 0.34
SCLT1-204ENST00000503215 ABCA7Q8IZY2 2146 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms