RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	ALYREF	Q86V81	257 aa	Known RBP	11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	FBXL13	Q8NEE6	735 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	NELFB	Q8WX92	580 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	FBXO32	Q969P5	355 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	ZFYVE19	Q96K21	471 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	NELL2	Q99435	816 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	SLC46A2	Q9BY10	475 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	B3GNT5	Q9BYG0	378 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	TDP1	Q9NUW8	608 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	LRRN2	O75325	713 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	F11	P03951	625 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	FAM200B	P0CF97	657 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	TARS	P26639	723 aa	Known RBP	11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	YWHAQ	P27348	245 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	ASPA	P45381	313 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	PPP3CC	P48454	512 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	MRE11	P49959	708 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	YWHAE	P62258	255 aa	Known RBP	11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	FCHO2	Q0JRZ9	810 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	CETN1	Q12798	172 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	PAK1	Q13153	545 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	LRRC32	Q14392	662 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	PPP2R5D	Q14738	602 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	CAMK4	Q16566	473 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	ITPRIPL2	Q3MIP1	535 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	COBLL1	Q53SF7	1204 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	ANKRD40	Q6AI12	368 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	MON1A	Q86VX9	555 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	UNC93A	Q86WB7	457 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	CREBRF	Q8IUR6	639 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	ADSSL1	Q8N142	457 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	TTC39C	Q8N584	583 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	PDZD8	Q8NEN9	1154 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	SLC2A14	Q8TDB8	520 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	EXOC4	Q96A65	974 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	RSPRY1	Q96DX4	576 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	C8orf48	Q96LL4	319 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	MYRFL	Q96LU7	910 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	NT5C1A	Q9BXI3	368 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	OSBPL6	Q9BZF3	934 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	SDCBP2	Q9H190	292 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	C8orf33	Q9H7E9	229 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	CYP3A43	Q9HB55	503 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	METTL14	Q9HCE5	456 aa	Known RBP	11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	NCAN	O14594	1321 aa		11.3	□□□□□ -0.6
CDK11A-222	ENST00000498810	C2orf78	A6NCI8	922 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	SPECC1L-ADORA2A	F8WAN1	911 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	TADA3	O75528	432 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	FGFR1OP	O95684	399 aa	Known RBP	11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	MBL2	P11226	248 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	GLUL	P15104	373 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	HDC	P19113	662 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	SOX9	P48436	509 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	SLC5A3	P53794	718 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	SLC8A3	P57103	927 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	AMPD2	Q01433	879 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	MTF1	Q14872	753 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	TPD52L1	Q16890	204 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	ZNF394	Q53GI3	561 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	C1orf210	Q8IVY1	113 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	ELOA2	Q8IYF1	753 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	NUP93	Q8N1F7	819 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	CPA6	Q8N4T0	437 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	ARL14EP	Q8N8R7	260 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	USP13	Q92995	863 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	CEP63	Q96MT8	703 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	TRPV5	Q9NQA5	729 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	CYLD	Q9NQC7	956 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	RAB20	Q9NX57	234 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	GTSE1	Q9NYZ3	720 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	HMGXB4	Q9UGU5	601 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	CCL26	Q9Y258	94 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	WDFY4	Q6ZS81	3184 aa		11.29	□□□□□ -0.6
CDK11A-222	ENST00000498810	SLC35F4	A4IF30	521 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	GOLGA6L22	H0YM25	854 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	WEE1	P30291	646 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	PMS1	P54277	932 aa	Known RBP	11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	CACNA2D1	P54289	1103 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	STX17	P56962	302 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	MAP3K7CL	P57077	242 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	TNK2	Q07912	1038 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	TAF10	Q12962	218 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	ZNF268	Q14587	947 aa	Predicted RBP	11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	PDGFRL	Q15198	375 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	C1orf220	Q5T0J3	134 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	TMEM150A	Q86TG1	271 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	RALGPS2	Q86X27	583 aa	Predicted RBP	11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	TRIML1	Q8N9V2	468 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	SPATA20	Q8TB22	786 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	RNF217	Q8TC41	542 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	SH3RF2	Q8TEC5	729 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	ATP2A3	Q93084	1043 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	HEXIM2	Q96MH2	286 aa	Known RBP	11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	GBP4	Q96PP9	640 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	HINFP	Q9BQA5	517 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	DDX23	Q9BUQ8	820 aa	Known RBP	11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	FBXO44	Q9H4M3	255 aa		11.28	□□□□□ -0.6
CDK11A-222	ENST00000498810	EBF3	Q9H4W6	596 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms