RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 GRIN1Q05586 938 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 MYO1EQ12965 1108 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 SLC14A1Q13336 389 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 RILPL1Q5EBL4 403 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 GRAMD4Q6IC98 578 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 VSTM1Q6UX27 236 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 ZNF720Q7Z2F6 126 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 DDX42Q86XP3 938 aaKnown RBP eCLIP9.71□□□□□ -0.86
CCDC171-209ENST00000498725 TMEM25Q86YD3 366 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 BBS7Q8IWZ6 715 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 ZCCHC9Q8N567 271 aaKnown RBP9.71□□□□□ -0.86
CCDC171-209ENST00000498725 KCTD17Q8N5Z5 321 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 TERB1Q8NA31 727 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 ADAM32Q8TC27 787 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 IPO4Q8TEX9 1081 aaKnown RBP9.71□□□□□ -0.86
CCDC171-209ENST00000498725 LARP4BQ92615 738 aaKnown RBP9.71□□□□□ -0.86
CCDC171-209ENST00000498725 KCNN1Q92952 543 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 BHMTQ93088 406 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 FBXO32Q969P5 355 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 PCED1BQ96HM7 432 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 HPDLQ96IR7 371 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 ANKRD36BP1Q96IX9 119 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 SLITRK1Q96PX8 696 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 ACCSQ96QU6 501 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 TTLL2Q9BWV7 592 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 SNX25Q9H3E2 840 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 CCSER2Q9H7U1 834 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 SPHK2Q9NRA0 654 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 DNAJC17Q9NVM6 304 aaKnown RBP9.71□□□□□ -0.86
CCDC171-209ENST00000498725 CACNA2D2Q9NY47 1150 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 TBC1D14Q9P2M4 693 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 CHORDC1Q9UHD1 332 aaPredicted RBP9.71□□□□□ -0.86
CCDC171-209ENST00000498725 A0A0A0MRY4 1105 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 E2F8A0AVK6 867 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 NEDD8-MDP1E9PL57 170 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 COCHO43405 550 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 ZNF217O75362 1048 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 CLSTN1O94985 981 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 TNNC2P02585 160 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 PFKLP17858 780 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 ABCD1P33897 745 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 MAPRE1Q15691 268 aaKnown RBP9.7□□□□□ -0.86
CCDC171-209ENST00000498725 WDR45BQ5MNZ6 344 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 TPGS1Q6ZTW0 290 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 NUDT18Q6ZVK8 323 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 CACUL1Q86Y37 369 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 ETFBKMTQ8IXQ9 262 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 GLIS3Q8NEA6 775 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 OR5B17Q8NGF7 314 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 OR6B3Q8NGW1 331 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 CXorf38Q8TB03 319 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 PIP4K2CQ8TBX8 421 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 MYCBPAPQ8TBZ2 947 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 RHBDD1Q8TEB9 315 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 SCFD1Q8WVM8 642 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 ZSCAN31Q96LW9 406 aaPredicted RBP9.7□□□□□ -0.86
CCDC171-209ENST00000498725 MRPL45Q9BRJ2 306 aaKnown RBP9.7□□□□□ -0.86
CCDC171-209ENST00000498725 CBWD1Q9BRT8 395 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 GPR174Q9BXC1 333 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 TRIM9Q9C026 710 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 ZNF518BQ9C0D4 1074 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 NACA2Q9H009 215 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 DPEP3Q9H4B8 488 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 FAM124BQ9H5Z6 455 aaPredicted RBP9.7□□□□□ -0.86
CCDC171-209ENST00000498725 GAREM1Q9H706 876 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 TMEM30AQ9NV96 361 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 EHD2Q9NZN4 543 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 SUSD2Q9UGT4 822 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 PCOLCE2Q9UKZ9 415 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 EXOC7Q9UPT5 735 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 PTPRJQ12913 1337 aa9.7□□□□□ -0.86
CCDC171-209ENST00000498725 MUC22E2RYF6 1773 aaPredicted RBP9.7□□□□□ -0.86
CCDC171-209ENST00000498725 TRABD2BA6NFA1 517 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 H3BQV1 296 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 PRPF6O94906 941 aaKnown RBP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 OLFM2O95897 454 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 LDHAP00338 332 aaKnown RBP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 NCAM1P13591 858 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 IDEP14735 1019 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 PTPN1P18031 435 aaKnown RBP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 WARSP23381 471 aaKnown RBP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 YWHAQP27348 245 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 GNL1P36915 607 aaPredicted RBP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 PPP3CCP48454 512 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 CASP5P51878 434 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 NOP14P78316 857 aaKnown RBP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 POU5F1Q01860 360 aaKnown RBP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 PREPLQ4J6C6 727 aaPredicted RBP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 L1TD1Q5T7N2 865 aaKnown RBP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 ARL6IP4Q66PJ3 421 aaKnown RBP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 SNX19Q92543 992 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 HVCN1Q96D96 273 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 TOE1Q96GM8 510 aaKnown RBP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 ZNF419Q96HQ0 510 aaPredicted RBP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 ZFRQ96KR1 1074 aaKnown RBP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 MRGPRX1Q96LB2 322 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 C8orf48Q96LL4 319 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 AK8Q96MA6 479 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 MED10Q9BTT4 135 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 BBS2Q9BXC9 721 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms