RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 C3orf38Q5JPI3 329 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 SP5Q6BEB4 398 aaPredicted RBP5.66□□□□□ -1.5
FXN-205ENST00000498653 PLPPR4Q7Z2D5 763 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 MRPL10Q7Z7H8 261 aaKnown RBP5.66□□□□□ -1.5
FXN-205ENST00000498653 NLRP8Q86W28 1048 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 CEP57Q86XR8 500 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 HOMER1Q86YM7 354 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 LEMD2Q8NC56 503 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 C9orf43Q8TAL5 461 aaPredicted RBP5.66□□□□□ -1.5
FXN-205ENST00000498653 CPT1CQ8TCG5 803 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 HASPINQ8TF76 798 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 PGBD4Q96DM1 585 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 MTMR8Q96EF0 704 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 PIGSQ96S52 555 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 PAAF1Q9BRP4 392 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 COLEC11Q9BWP8 271 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 PHACTR1Q9C0D0 580 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 MIR1-1HGQ9H1L0 117 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 CRISPLD1Q9H336 500 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 ASAH2Q9NR71 780 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 PIN4Q9Y237 131 aaKnown RBP5.66□□□□□ -1.5
FXN-205ENST00000498653 MRPL11Q9Y3B7 192 aaKnown RBP5.66□□□□□ -1.5
FXN-205ENST00000498653 PCDHB2Q9Y5E7 798 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 PRRC2AP48634 2157 aaKnown RBP5.66□□□□□ -1.5
FXN-205ENST00000498653 DENND4CQ5VZ89 1909 aa5.66□□□□□ -1.5
FXN-205ENST00000498653 DIDO1Q9BTC0 2240 aaKnown RBP5.66□□□□□ -1.5
FXN-205ENST00000498653 PRKDCP78527 4128 aaKnown RBP5.65□□□□□ -1.5
FXN-205ENST00000498653 MEI4A8MW99 385 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 hCG_1984214I3L0E3 225 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 GRID2O43424 1007 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 PRICKLE3O43900 615 aaPredicted RBP5.65□□□□□ -1.5
FXN-205ENST00000498653 DTNBO60941 627 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 CSO75390 466 aaKnown RBP5.65□□□□□ -1.5
FXN-205ENST00000498653 KIF4AO95239 1232 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 RARGP13631 454 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 FDPSP14324 419 aaKnown RBP5.65□□□□□ -1.5
FXN-205ENST00000498653 PDCP20941 246 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 TXLNAP40222 546 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 MLH1P40692 756 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 CSNK1EP49674 416 aaKnown RBP5.65□□□□□ -1.5
FXN-205ENST00000498653 AMPD2Q01433 879 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 ROR1Q01973 937 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 KLRB1Q12918 225 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 OCLNQ16625 522 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 QRICH1Q2TAL8 776 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 KCNT1Q5JUK3 1230 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 FAM171A1Q5VUB5 890 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 BORAQ6PGQ7 559 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 LAYNQ6UX15 382 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 Q71RC1 249 aaPredicted RBP5.65□□□□□ -1.5
FXN-205ENST00000498653 HEATR3Q7Z4Q2 680 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 ALDH16A1Q8IZ83 802 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 FAM177A1Q8N128 213 aaPredicted RBP5.65□□□□□ -1.5
FXN-205ENST00000498653 ZNF713Q8N859 430 aaPredicted RBP5.65□□□□□ -1.5
FXN-205ENST00000498653 ARL14EPQ8N8R7 260 aaPredicted RBP5.65□□□□□ -1.5
FXN-205ENST00000498653 GIMAP8Q8ND71 665 aaPredicted RBP5.65□□□□□ -1.5
FXN-205ENST00000498653 CCDC26Q8TAB7 109 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 CCDC12Q8WUD4 166 aaPredicted RBP5.65□□□□□ -1.5
FXN-205ENST00000498653 TNPO1Q92973 898 aaKnown RBP5.65□□□□□ -1.5
FXN-205ENST00000498653 ARSGQ96EG1 525 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 C8orf76Q96K31 380 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 SLITRK1Q96PX8 696 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 MTMR9Q96QG7 549 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 TRIM8Q9BZR9 551 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 SMG9Q9H0W8 520 aaKnown RBP5.65□□□□□ -1.5
FXN-205ENST00000498653 AZI2Q9H6S1 392 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 RUBCNLQ9H714 662 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 PTPRHQ9HD43 1115 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 ZDHHC4Q9NPG8 344 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 SH3GLB2Q9NR46 395 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 PPM1HQ9ULR3 514 aa5.65□□□□□ -1.5
FXN-205ENST00000498653 ZNF638Q14966 1978 aaKnown RBP5.64□□□□□ -1.51
FXN-205ENST00000498653 DOCK9Q9BZ29 2069 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 A0A1W2PNR3 127 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 ARL5CA6NH57 179 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 H3BQV1 296 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 PRRG1O14668 218 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 HBP1O60381 514 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 ABLIM3O94929 683 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 PRKCBP05771 671 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 PDIA4P13667 645 aaKnown RBP5.64□□□□□ -1.51
FXN-205ENST00000498653 ATP4AP20648 1035 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 ACP1P24666 158 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 RBMS1P29558 406 aaKnown RBP5.64□□□□□ -1.51
FXN-205ENST00000498653 SLC6A4P31645 630 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 PTGER4P35408 488 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 STAT5BP51692 787 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 NAPAP54920 295 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 NLRP5P59047 1200 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 MRPS21P82921 87 aaKnown RBP5.64□□□□□ -1.51
FXN-205ENST00000498653 MESP2Q0VG99 397 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 SAFBQ15424 915 aaKnown RBP eCLIP5.64□□□□□ -1.51
FXN-205ENST00000498653 SHBQ15464 509 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 UBXN11Q5T124 520 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 WWC2Q6AWC2 1192 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 GAREM2Q75VX8 874 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 VASH2Q86V25 355 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 TGIF2LYQ8IUE0 185 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 TCEAL8Q8IYN2 117 aa5.64□□□□□ -1.51
FXN-205ENST00000498653 METTL13Q8N6R0 699 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms