RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 CA14Q9ULX7 337 aa20.8■□□□□ 0.92
ACTN4-208ENST00000497637 PCDHGA2Q9Y5H1 932 aa20.8■□□□□ 0.92
ACTN4-208ENST00000497637 PCDHA3Q9Y5H8 950 aa20.8■□□□□ 0.92
ACTN4-208ENST00000497637 FANCMQ8IYD8 2048 aa20.8■□□□□ 0.92
ACTN4-208ENST00000497637 CCDC66A2RUB6 948 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 DCDC2BA2VCK2 349 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 KPNA7A9QM74 516 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 SPOPO43791 374 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 PROSCO94903 275 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 CTSAP10619 480 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 CTNNA1P35221 906 aaKnown RBP20.79■□□□□ 0.92
ACTN4-208ENST00000497637 SV2CQ496J9 727 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 DCAF12L1Q5VU92 463 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 WDR93Q6P2C0 686 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 PHLDB2Q86SQ0 1253 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 SLC44A3Q8N4M1 653 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 ALG3Q92685 438 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 SHDQ96IW2 340 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 PNKPQ96T60 521 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 ZBP1Q9H171 429 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 ARHGEF3Q9NR81 526 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 RBM12Q9NTZ6 932 aaKnown RBP20.79■□□□□ 0.92
ACTN4-208ENST00000497637 STRIP2Q9ULQ0 834 aa20.79■□□□□ 0.92
ACTN4-208ENST00000497637 CCDC151A5D8V7 595 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 SKIP12755 728 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 MCM3P25205 808 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 MAN1A1P33908 653 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 GSCP56915 257 aaPredicted RBP20.78■□□□□ 0.92
ACTN4-208ENST00000497637 ORC1Q13415 861 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 COL9A2Q14055 689 aaPredicted RBP20.78■□□□□ 0.92
ACTN4-208ENST00000497637 SOWAHAQ2M3V2 549 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 C2CD6Q53TS8 623 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 AGMOQ6ZNB7 445 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 DPH6Q7L8W6 267 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 DDX53Q86TM3 631 aaKnown RBP20.78■□□□□ 0.92
ACTN4-208ENST00000497637 GSTCDQ8NEC7 633 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 KRT35Q92764 455 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 GAD1Q99259 594 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 DNAI2Q9GZS0 605 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 WDR35Q9P2L0 1181 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 EPS15L1Q9UBC2 864 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 STK39Q9UEW8 545 aa20.78■□□□□ 0.92
ACTN4-208ENST00000497637 A0A0U1RQF3 1178 aa20.77■□□□□ 0.92
ACTN4-208ENST00000497637 TMEM191CA6NGB0 347 aa20.77■□□□□ 0.92
ACTN4-208ENST00000497637 CCDC188H7C350 402 aa20.77■□□□□ 0.92
ACTN4-208ENST00000497637 BCAR1P56945 870 aa20.77■□□□□ 0.92
ACTN4-208ENST00000497637 RNASE9P60153 205 aaKnown RBP20.77■□□□□ 0.92
ACTN4-208ENST00000497637 DMWDQ09019 674 aa20.77■□□□□ 0.92
ACTN4-208ENST00000497637 ZNF268Q14587 947 aaPredicted RBP20.77■□□□□ 0.92
ACTN4-208ENST00000497637 PTPN20Q4JDL3 420 aa20.77■□□□□ 0.92
ACTN4-208ENST00000497637 PPP1R15BQ5SWA1 713 aa20.77■□□□□ 0.92
ACTN4-208ENST00000497637 ARHGAP17Q68EM7 881 aa20.77■□□□□ 0.92
ACTN4-208ENST00000497637 DNAJC24Q6P3W2 148 aa20.77■□□□□ 0.92
ACTN4-208ENST00000497637 CRYBG2Q8N1P7 616 aa20.77■□□□□ 0.92
ACTN4-208ENST00000497637 TOP6BLQ8N6T0 577 aa20.77■□□□□ 0.92
ACTN4-208ENST00000497637 NAP1L3Q99457 506 aaPredicted RBP20.77■□□□□ 0.92
ACTN4-208ENST00000497637 TRIM7Q9C029 511 aa20.77■□□□□ 0.92
ACTN4-208ENST00000497637 IP6K2Q9UHH9 426 aa20.77■□□□□ 0.92
ACTN4-208ENST00000497637 CYTH4Q9UIA0 394 aa20.77■□□□□ 0.92
ACTN4-208ENST00000497637 FASNP49327 2511 aaKnown RBP20.76■□□□□ 0.91
ACTN4-208ENST00000497637 THP07101 528 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 SETSIPP0DME0 302 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 GPD2P43304 727 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 GABRB2P47870 512 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 LILRA4P59901 499 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 ELMSAN1Q6PJG2 1045 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 DCLRE1AQ6PJP8 1040 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 TMCO3Q6UWJ1 677 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 ECHDC2Q86YB7 292 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 CPNE8Q86YQ8 564 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 C3orf20Q8ND61 904 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 CMASQ8NFW8 434 aaPredicted RBP20.76■□□□□ 0.91
ACTN4-208ENST00000497637 PJA1Q8NG27 643 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 OR6B3Q8NGW1 331 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 HNRNPLLQ8WVV9 542 aaKnown RBP20.76■□□□□ 0.91
ACTN4-208ENST00000497637 PGBD4Q96DM1 585 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 C18orf8Q96DM3 657 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 ZFP42Q96MM3 310 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 LRRC1Q9BTT6 524 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 EMILIN2Q9BXX0 1053 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 RHOBTB2Q9BYZ6 727 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 UBN1Q9NPG3 1134 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 MIOSQ9NXC5 875 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 NME7Q9Y5B8 376 aa20.76■□□□□ 0.91
ACTN4-208ENST00000497637 MEIS3P2A8K0S8 358 aa20.75■□□□□ 0.91
ACTN4-208ENST00000497637 M0QYV0 167 aa20.75■□□□□ 0.91
ACTN4-208ENST00000497637 LAMTOR5O43504 91 aa20.75■□□□□ 0.91
ACTN4-208ENST00000497637 WARSP23381 471 aaKnown RBP20.75■□□□□ 0.91
ACTN4-208ENST00000497637 GBP2P32456 591 aaPredicted RBP20.75■□□□□ 0.91
ACTN4-208ENST00000497637 RPL9P32969 192 aaKnown RBP20.75■□□□□ 0.91
ACTN4-208ENST00000497637 GNL1P36915 607 aaPredicted RBP20.75■□□□□ 0.91
ACTN4-208ENST00000497637 RWDD2BP57060 319 aa20.75■□□□□ 0.91
ACTN4-208ENST00000497637 VSNL1P62760 191 aa20.75■□□□□ 0.91
ACTN4-208ENST00000497637 ACOT1Q86TX2 421 aa20.75■□□□□ 0.91
ACTN4-208ENST00000497637 MAML2Q8IZL2 1156 aaPredicted RBP20.75■□□□□ 0.91
ACTN4-208ENST00000497637 GPR152Q8TDT2 470 aa20.75■□□□□ 0.91
ACTN4-208ENST00000497637 KBTBD7Q8WVZ9 684 aa20.75■□□□□ 0.91
ACTN4-208ENST00000497637 RSAD2Q8WXG1 361 aa20.75■□□□□ 0.91
ACTN4-208ENST00000497637 LPPQ93052 612 aa20.75■□□□□ 0.91
ACTN4-208ENST00000497637 MIS12Q9H081 205 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms