RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 RPL10P27635 214 aaKnown RBP13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 STAT2P52630 851 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 OTUD4Q01804 1114 aaKnown RBP13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 KRT39Q6A163 491 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 SPOPLQ6IQ16 392 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 PACS1Q6VY07 963 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 CCDC80Q76M96 950 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 KATNAL2Q8IYT4 538 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 DDI1Q8WTU0 396 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 LENG9Q96B70 501 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 THAP11Q96EK4 314 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 SLITRK1Q96PX8 696 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 PPCSQ9HAB8 311 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 VAV3Q9UKW4 847 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 COQ6Q9Y2Z9 468 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 SF3B1O75533 1304 aaKnown RBP eCLIP13.55□□□□□ -0.242e-6■■■■■ 48.7
GAPVD1-220ENST00000497580 ITM2AO43736 263 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 DHRS4L1P0CG22 281 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 GSTT2P0CG29 244 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 GSTT2BP0CG30 244 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 THRAP10827 490 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 DSG3P32926 999 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 SEPT6Q14141 434 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 FLOT2Q14254 428 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 SPOCD1Q6ZMY3 1216 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 FRMD7Q6ZUT3 714 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 BBS5Q8N3I7 341 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 GFM2Q969S9 779 aaKnown RBP13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 FAM20AQ96MK3 541 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 PCDH9Q9HC56 1237 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 TMEM150BA6NC51 233 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 SIN3BO75182 1162 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 KRT37O76014 449 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 CYP3A4P08684 503 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 PSMC3P17980 439 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 CD151P48509 253 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 NUDT2P50583 147 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 KPNA1P52294 538 aaPredicted RBP13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 XIAPP98170 497 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 HELQQ8TDG4 1101 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 C17orf50Q8WW18 174 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 VTI1AQ96AJ9 217 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 PPP1R14BQ96C90 147 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 GPRC5CQ9NQ84 441 aa13.55□□□□□ -0.24
GAPVD1-220ENST00000497580 NDUFB5O43674 189 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 CSPG5O95196 566 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 ITGAXP20702 1163 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 RPL22P35268 128 aaKnown RBP13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 PEX3P56589 373 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 PHEXP78562 749 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 AMIGO3Q86WK7 504 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 PHTF2Q8N3S3 785 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 CCDC33Q8N5R6 958 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 ZSCAN18Q8TBC5 510 aaPredicted RBP13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 DDX1Q92499 740 aaKnown RBP13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 MCEEQ96PE7 176 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 WRNIP1Q96S55 665 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 NUF2Q9BZD4 464 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 CD209Q9NNX6 404 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 PNPOQ9NVS9 261 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 RREB1Q92766 1687 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 SH3PXD2BA1X283 911 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 H3BNX3 289 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 GRIN3BO60391 1043 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 CCNT2O60583 730 aaKnown RBP13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 CST8O60676 142 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 SEC24DO94855 1032 aaPredicted RBP13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 MAP3K6O95382 1288 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 SERPINB5P36952 375 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 PSMC1P62191 440 aaKnown RBP13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 PDAP1Q13442 181 aaKnown RBP13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 SNRNP35Q16560 246 aaKnown RBP13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 GPATCH4Q5T3I0 446 aaKnown RBP13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 PDPK2PQ6A1A2 396 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 PADI6Q6TGC4 694 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 XKR5Q6UX68 686 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 FBXL13Q8NEE6 735 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 NLRP7Q8WX94 980 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 EME1Q96AY2 570 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 C7orf26Q96N11 449 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 ACCSQ96QU6 501 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 LXNQ9BS40 222 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 C1orf112Q9NSG2 853 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 C10orf71Q711Q0 1435 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 BTBD19C9JJ37 291 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 FBXW8Q8N3Y1 598 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 LRRN4Q8WUT4 740 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 CASP10Q92851 521 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 CCNL1Q9UK58 526 aaPredicted RBP13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 PSMD13Q9UNM6 376 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 PLLPQ9Y342 182 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 LRP5O75197 1615 aa13.54□□□□□ -0.24
GAPVD1-220ENST00000497580 CXorf49A8MYA2 514 aaPredicted RBP13.53□□□□□ -0.24
GAPVD1-220ENST00000497580 J3QRK9 145 aa13.53□□□□□ -0.24
GAPVD1-220ENST00000497580 CD300CQ08708 224 aa13.53□□□□□ -0.24
GAPVD1-220ENST00000497580 MAMLD1Q13495 774 aa13.53□□□□□ -0.24
GAPVD1-220ENST00000497580 ITGA7Q13683 1181 aa13.53□□□□□ -0.24
GAPVD1-220ENST00000497580 TMEM270Q6UE05 265 aa13.53□□□□□ -0.24
GAPVD1-220ENST00000497580 LRRC43Q8N309 656 aa13.53□□□□□ -0.24
GAPVD1-220ENST00000497580 FBXL8Q96CD0 374 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms