RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 POLBP06746 335 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 CSF1P09603 554 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 CKBP12277 381 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 XBP1P17861 261 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 BTF3P20290 206 aaKnown RBP2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 DDCP20711 480 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 HOXD10P28358 340 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 GDNFP39905 211 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 CARSP49589 748 aaKnown RBP2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 RIPPLY3P57055 190 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 ACTR2P61160 394 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 CCT2P78371 535 aaKnown RBP2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 UBE3AQ05086 875 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 GRIN1Q05586 938 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 MGAT5Q09328 741 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 MAPK7Q13164 816 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 SLC13A2Q13183 592 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 TRPC3Q13507 836 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 RAB32Q13637 225 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 LRP8Q14114 963 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 PLCL1Q15111 1095 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 TOMM20Q15388 145 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 TAF5Q15542 800 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 TARBP2Q15633 366 aaKnown RBP2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 LRRC26Q2I0M4 334 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 PABPC1LQ4VXU2 614 aaKnown RBP2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 SLC44A4Q53GD3 710 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 SOWAHCQ53LP3 525 aaPredicted RBP2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 C3orf38Q5JPI3 329 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 RALGPS1Q5JS13 557 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 SPECC1Q5M775 1068 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 SLC10A5Q5PT55 438 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 TTC22Q5TAA0 569 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 GRAMD4Q6IC98 578 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 INO80CQ6PI98 192 aaPredicted RBP2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 PPP1R32Q7Z5V6 425 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 CLEC14AQ86T13 490 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 FAM129CQ86XR2 697 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 SLC44A2Q8IWA5 706 aaPredicted RBP2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 RPAP2Q8IXW5 612 aaPredicted RBP2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 TXLNBQ8N3L3 684 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 OR6Y1Q8NGX8 325 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 SHKBP1Q8TBC3 707 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 STYXQ8WUJ0 223 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 NUP133Q8WUM0 1156 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 IP6K1Q92551 441 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 ERCC4Q92889 916 aaPredicted RBP2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 MUL1Q969V5 352 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 DYDC2Q96IM9 177 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 WRNIP1Q96S55 665 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 VRK1Q99986 396 aaPredicted RBP2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 OSBPL1AQ9BXW6 950 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 MAGEB5Q9BZ81 275 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 VPS33BQ9H267 617 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 FAM83DQ9H4H8 585 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 ARMT1Q9H993 441 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 PREBQ9HCU5 417 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 SLC39A2Q9NP94 309 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 HELLSQ9NRZ9 838 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 RXFP3Q9NSD7 469 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 ANKEF1Q9NU02 776 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 ANKFY1Q9P2R3 1169 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 DKK4Q9UBT3 224 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 SIT1Q9Y3P8 196 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 AFG3L2Q9Y4W6 797 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 CEP83Q9Y592 693 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 COL4A4P53420 1690 aaPredicted RBP2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 SCN7AQ01118 1682 aa2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 TLN1Q9Y490 2541 aaKnown RBP2.78□□□□□ -1.96
CKS1BP2-201ENST00000497342 ZFHX3Q15911 3703 aa2.78□□□□□ -1.97
CKS1BP2-201ENST00000497342 FREM2Q5SZK8 3169 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 SOS1Q07889 1333 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 TTC21BQ7Z4L5 1316 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 CNTNAP5Q8WYK1 1306 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 NF1P21359 2839 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 A0A0G2JNJ9 132 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 AQP12BA6NM10 295 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 MASP2O00187 686 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 TRIM38O00635 465 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 PCDH17O14917 1159 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 CYP26A1O43174 497 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 DAPK3O43293 454 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 PPIP5K2O43314 1243 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 URI1O94763 535 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 CHEK2O96017 543 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 KNG1P01042 644 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 PROS1P07225 676 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 CYP2C9P11712 490 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 IL11P20809 199 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 RRM1P23921 792 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 TACR1P25103 407 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 PCSK1P29120 753 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 ARL4AP40617 200 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 VIPR2P41587 438 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 ADAM8P78325 824 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 ZNF200P98182 395 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 CACNB2Q08289 660 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 NSUN2Q08J23 767 aaKnown RBP eCLIP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms