RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PDE1AP54750 535 aa5.62□□□□□ -1.51
VPS36-206ENST00000497149 HECTD2Q5U5R9 776 aa5.62□□□□□ -1.51
VPS36-206ENST00000497149 ZNF551Q7Z340 670 aaPredicted RBP5.62□□□□□ -1.51
VPS36-206ENST00000497149 PEG10Q86TG7 708 aaKnown RBP5.62□□□□□ -1.51
VPS36-206ENST00000497149 METTL25Q8N6Q8 603 aa5.62□□□□□ -1.51
VPS36-206ENST00000497149 ATG16L2Q8NAA4 619 aa5.62□□□□□ -1.51
VPS36-206ENST00000497149 SUN3Q8TAQ9 357 aa5.62□□□□□ -1.51
VPS36-206ENST00000497149 FAM71BQ8TC56 605 aa5.62□□□□□ -1.51
VPS36-206ENST00000497149 ACTRT2Q8TDY3 377 aa5.62□□□□□ -1.51
VPS36-206ENST00000497149 SLC9A6Q92581 669 aa5.62□□□□□ -1.51
VPS36-206ENST00000497149 DPCDQ9BVM2 203 aaPredicted RBP5.62□□□□□ -1.51
VPS36-206ENST00000497149 TOR3AQ9H497 397 aa5.62□□□□□ -1.51
VPS36-206ENST00000497149 TRIM36Q9NQ86 728 aa5.62□□□□□ -1.51
VPS36-206ENST00000497149 SERTAD4Q9NUC0 356 aa5.62□□□□□ -1.51
VPS36-206ENST00000497149 FOXJ2Q9P0K8 574 aa5.62□□□□□ -1.51
VPS36-206ENST00000497149 NKX1-2Q9UD57 310 aaPredicted RBP5.62□□□□□ -1.51
VPS36-206ENST00000497149 GABRQQ9UN88 632 aa5.62□□□□□ -1.51
VPS36-206ENST00000497149 ZSCAN9O15535 394 aaPredicted RBP5.61□□□□□ -1.51
VPS36-206ENST00000497149 NTSR2O95665 410 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 GLP2RO95838 553 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 VIPP01282 170 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 PRKCBP05771 671 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 SRGAP2BP0DMP2 458 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 JUPP14923 745 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 CD19P15391 556 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 PCSK6P29122 969 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 HTR7P34969 479 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 SERPINF1P36955 418 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 HALP42357 657 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 ZNF169Q14929 603 aaPredicted RBP5.61□□□□□ -1.51
VPS36-206ENST00000497149 CLCA4Q14CN2 919 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 PRR16Q569H4 304 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 ANO1Q5XXA6 986 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 PARS2Q7L3T8 475 aaKnown RBP5.61□□□□□ -1.51
VPS36-206ENST00000497149 RASGRP3Q8IV61 690 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 NKAPQ8N5F7 415 aaKnown RBP5.61□□□□□ -1.51
VPS36-206ENST00000497149 STYXQ8WUJ0 223 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 GRAMD1AQ96CP6 724 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 PDLIM2Q96JY6 352 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 RMDN3Q96TC7 470 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 PRPF18Q99633 342 aaKnown RBP5.61□□□□□ -1.51
VPS36-206ENST00000497149 HERPUD2Q9BSE4 406 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 HELLSQ9NRZ9 838 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 STEAP1Q9UHE8 339 aa5.61□□□□□ -1.51
VPS36-206ENST00000497149 SYT5O00445 386 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 FOXN1O15353 648 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 PMPCBO75439 489 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 URI1O94763 535 aaPredicted RBP5.6□□□□□ -1.51
VPS36-206ENST00000497149 ITGA5P08648 1049 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 ELFN1P0C7U0 828 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 NPPBP16860 134 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 GKP32189 559 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 CYP2C18P33260 490 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 ACOX1Q15067 660 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 CYP1B1Q16678 543 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 TRIM71Q2Q1W2 868 aaKnown RBP5.6□□□□□ -1.51
VPS36-206ENST00000497149 TLDC1Q6P9B6 456 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 CACNA2D3Q8IZS8 1091 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 FSTL5Q8N475 847 aaPredicted RBP5.6□□□□□ -1.51
VPS36-206ENST00000497149 LRRC71Q8N4P6 559 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 MYCT1Q8N699 235 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 RP9Q8TA86 221 aaKnown RBP5.6□□□□□ -1.51
VPS36-206ENST00000497149 CTHRC1Q96CG8 243 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 EID2BQ96D98 161 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 WDR24Q96S15 920 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 AGO4Q9HCK5 861 aaKnown RBP5.6□□□□□ -1.51
VPS36-206ENST00000497149 DACT1Q9NYF0 836 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 DLL3Q9NYJ7 618 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 LRFN1Q9P244 771 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 CCNL1Q9UK58 526 aaPredicted RBP5.6□□□□□ -1.51
VPS36-206ENST00000497149 PACSIN3Q9UKS6 424 aa5.6□□□□□ -1.51
VPS36-206ENST00000497149 SCAF8Q9UPN6 1271 aaKnown RBP5.6□□□□□ -1.51
VPS36-206ENST00000497149 LINC00473A8K010 186 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 KIAA0355O15063 1070 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 ASNA1O43681 348 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 ORC4O43929 436 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 PIP5K1CO60331 668 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 CBFA2T3O75081 653 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 USP1O94782 785 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 TNFRSF6BO95407 300 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 TTLL1O95922 423 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 GCP02774 474 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 DLDP09622 509 aaKnown RBP5.59□□□□□ -1.51
VPS36-206ENST00000497149 YY1P25490 414 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 CTGFP29279 349 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 ACVRL1P37023 503 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 PLA2G5P39877 138 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 GRK6P43250 576 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 RARRES1P49788 294 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 TPTEP56180 551 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 ZXDAP98168 799 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 FOXO1Q12778 655 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 ZRSR2Q15696 482 aaKnown RBP5.59□□□□□ -1.51
VPS36-206ENST00000497149 TBC1D25Q3MII6 688 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 INO80DQ53TQ3 878 aaPredicted RBP5.59□□□□□ -1.51
VPS36-206ENST00000497149 DPY19L3Q6ZPD9 716 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 Q6ZWC4 215 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 WDR53Q7Z5U6 358 aaPredicted RBP5.59□□□□□ -1.51
VPS36-206ENST00000497149 AMER2Q8N7J2 671 aa5.59□□□□□ -1.51
VPS36-206ENST00000497149 CCT6BQ92526 530 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms