RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 NSFP46459 744 aaKnown RBP13.47□□□□□ -0.25
VEGFA-215ENST00000497139 CCR3P51677 355 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 STX3Q13277 289 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 TPTE2Q6XPS3 522 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 AMIGO2Q86SJ2 522 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 MAPKAPK5Q8IW41 473 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 DEFB107AQ8IZN7 70 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 XXYLT1Q8NBI6 393 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 NLRP7Q8WX94 980 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 CCDC124Q96CT7 223 aaKnown RBP13.47□□□□□ -0.25
VEGFA-215ENST00000497139 HSD17B14Q9BPX1 270 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 NEURL2Q9BR09 285 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 UNKQ9C0B0 810 aaKnown RBP13.47□□□□□ -0.25
VEGFA-215ENST00000497139 BCAS3Q9H6U6 928 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 XAB2Q9HCS7 855 aaKnown RBP13.47□□□□□ -0.25
VEGFA-215ENST00000497139 GNPTGQ9UJJ9 305 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 SGK1O00141 431 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 SIN3BO75182 1162 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 H6PDO95479 791 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 BPGMP07738 259 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 GSTT2P0CG29 244 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 GSTT2BP0CG30 244 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 STT3AP46977 705 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 CYP4A11Q02928 519 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 MSS51Q4VC12 460 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 STXBP5Q5T5C0 1151 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 DEPDC1Q5TB30 811 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 TRIM72Q6ZMU5 477 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 MON1BQ7L1V2 547 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 HPS6Q86YV9 775 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 CHERPQ8IWX8 916 aaKnown RBP13.47□□□□□ -0.25
VEGFA-215ENST00000497139 RDH13Q8NBN7 331 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 SLC35B2Q8TB61 432 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 SHKBP1Q8TBC3 707 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 PIWIL2Q8TC59 973 aaKnown RBP13.47□□□□□ -0.25
VEGFA-215ENST00000497139 WDR83Q9BRX9 315 aaKnown RBP13.47□□□□□ -0.25
VEGFA-215ENST00000497139 RTKNQ9BST9 563 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 GINM1Q9NU53 330 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 VPS28Q9UK41 221 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 TRIM17Q9Y577 477 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 TBC1D12O60347 775 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 ADAM23O75077 832 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 BANF1O75531 89 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 EEF2P13639 858 aaKnown RBP13.46□□□□□ -0.25
VEGFA-215ENST00000497139 POLD1P28340 1107 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 SREBF1P36956 1147 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 STAT2P52630 851 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 ZBTB17Q13105 803 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 ITGA7Q13683 1181 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 SEPT6Q14141 434 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 PLA2G4FQ68DD2 849 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 NEPROQ6NW34 567 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 DCLRE1AQ6PJP8 1040 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 ARMCX6Q7L4S7 300 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 EFHD2Q96C19 240 aaPredicted RBP13.46□□□□□ -0.25
VEGFA-215ENST00000497139 PHF12Q96QT6 1004 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 TRPC7Q9HCX4 862 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 HEY1Q9Y5J3 304 aa13.46□□□□□ -0.25
VEGFA-215ENST00000497139 USP17L15C9J2P7 530 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 USP17L13C9JLJ4 530 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 USP17L11C9JVI0 530 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 USP17L18D6R9N7 530 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 USP17L22D6RA61 530 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 USP17L17D6RBQ6 530 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 USP17L19D6RCP7 530 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 USP17L20D6RJB6 530 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 CDH3P22223 829 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 ESRRGP62508 458 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 USP17L24Q0WX57 530 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 DPYSQ14117 519 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 USP17L6PQ6QN14 398 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 SEPT12Q8IYM1 358 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 EBF4Q9BQW3 602 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 SLC38A7Q9NVC3 462 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 EPS15L1Q9UBC2 864 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 IP6K2Q9UHH9 426 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 TSC22D4Q9Y3Q8 395 aa13.46□□□□□ -0.26
VEGFA-215ENST00000497139 TCRBV9S1A1TA0A576 114 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 KLRK1P26718 216 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 CRKLP46109 303 aaKnown RBP13.45□□□□□ -0.26
VEGFA-215ENST00000497139 NEK2P51955 445 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 RPS3AP61247 264 aaKnown RBP13.45□□□□□ -0.26
VEGFA-215ENST00000497139 GCNT1Q02742 428 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 FSCBQ5H9T9 825 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 TCHHL1Q5QJ38 904 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-215ENST00000497139 PLEKHA7Q6IQ23 1121 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 SPOCD1Q6ZMY3 1216 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 GPR180Q86V85 440 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 ZNF420Q8TAQ5 688 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-215ENST00000497139 ACCSQ96QU6 501 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 OLFM1Q99784 485 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 GPATCH1Q9BRR8 931 aaKnown RBP13.45□□□□□ -0.26
VEGFA-215ENST00000497139 TRIM56Q9BRZ2 755 aaKnown RBP13.45□□□□□ -0.26
VEGFA-215ENST00000497139 GCOM2Q9BZD3 368 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-215ENST00000497139 HIPK3Q9H422 1215 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 PNPLA3Q9NST1 481 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 DDX56Q9NY93 547 aaKnown RBP13.45□□□□□ -0.26
VEGFA-215ENST00000497139 PCDHGB4Q9UN71 923 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 B3GNT3Q9Y2A9 372 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 MYRFQ9Y2G1 1151 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms