RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 ANKRD40Q6AI12 368 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 CEP68Q76N32 757 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 SYT13Q7L8C5 426 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 BBS7Q8IWZ6 715 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 FAM160A2Q8N612 972 aaPredicted RBP15.94■□□□□ 0.14
NEK4-206ENST00000496822 FBXL13Q8NEE6 735 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 NMUR1Q9HB89 426 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 RAB20Q9NX57 234 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 DLL3Q9NYJ7 618 aa15.94■□□□□ 0.14
NEK4-206ENST00000496822 CIZ1Q9ULV3 898 aaPredicted RBP15.94■□□□□ 0.14
NEK4-206ENST00000496822 ATG2BQ96BY7 2078 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 CACNA1AO00555 2505 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 E2F8A0AVK6 867 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 SLC16A3O15427 465 aaKnown RBP15.93■□□□□ 0.14
NEK4-206ENST00000496822 ADH5P11766 374 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 ACO1P21399 889 aaKnown RBP15.93■□□□□ 0.14
NEK4-206ENST00000496822 C2orf27AQ580R0 203 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 LY6G5CQ5SRR4 150 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 TCERG1LQ5VWI1 586 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 ISM2Q6H9L7 571 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 GPR161Q8N6U8 529 aaKnown RBP15.93■□□□□ 0.14
NEK4-206ENST00000496822 CCDC150Q8NCX0 1101 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 USP33Q8TEY7 942 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 GAB3Q8WWW8 586 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 TATDN2Q93075 761 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 SMARCE1Q969G3 411 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 ACDQ96AP0 544 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 FBXO44Q9H4M3 255 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 CISHQ9NSE2 258 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 SCML2Q9UQR0 700 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 SH3BP1Q9Y3L3 701 aa15.93■□□□□ 0.14
NEK4-206ENST00000496822 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.93■□□□□ 0.14
NEK4-206ENST00000496822 CCDC163A0A0D9SF12 145 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 A0A1W2PQH9 124 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 MDM4O15151 490 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 GREM1O60565 184 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 RPP40O75818 363 aaKnown RBP15.92■□□□□ 0.14
NEK4-206ENST00000496822 SMC2O95347 1197 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 ADH1CP00326 375 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 CD44P16070 742 aaKnown RBP15.92■□□□□ 0.14
NEK4-206ENST00000496822 TRIM21P19474 475 aaKnown RBP15.92■□□□□ 0.14
NEK4-206ENST00000496822 LMNB2Q03252 620 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 KDSRQ06136 332 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 PUM1Q14671 1186 aaKnown RBP eCLIP15.92■□□□□ 0.14
NEK4-206ENST00000496822 ERMP1Q7Z2K6 904 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 KBTBD6Q86V97 674 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 CAMKK1Q8N5S9 505 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 SLC4A11Q8NBS3 891 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 TIGD1Q96MW7 591 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 TSG101Q99816 390 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 KLF16Q9BXK1 252 aaPredicted RBP15.92■□□□□ 0.14
NEK4-206ENST00000496822 NACA2Q9H009 215 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 PNPLA8Q9NP80 782 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 CYLDQ9NQC7 956 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 TLR8Q9NR97 1041 aaKnown RBP15.92■□□□□ 0.14
NEK4-206ENST00000496822 TBC1D14Q9P2M4 693 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 NUDT5Q9UKK9 219 aa15.92■□□□□ 0.14
NEK4-206ENST00000496822 AXIN1O15169 862 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 STX10O60499 249 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 KAT7O95251 611 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 CCDC192P0DO97 292 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 RAD23BP54727 409 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 FKBP3Q00688 224 aaKnown RBP15.91■□□□□ 0.14
NEK4-206ENST00000496822 DGLUCYQ7Z3D6 616 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 SCD5Q86SK9 330 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 ETFBKMTQ8IXQ9 262 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 PHTF2Q8N3S3 785 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 CCDC33Q8N5R6 958 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 SLC35C1Q96A29 364 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 HEXIM2Q96MH2 286 aaKnown RBP15.91■□□□□ 0.14
NEK4-206ENST00000496822 PNKPQ96T60 521 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 DUSP16Q9BY84 665 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 ZDHHC4Q9NPG8 344 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 SEMA4GQ9NTN9 838 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 MAN1B1Q9UKM7 699 aa15.91■□□□□ 0.14
NEK4-206ENST00000496822 EML5Q05BV3 1969 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 MED19A0JLT2 244 aaPredicted RBP15.9■□□□□ 0.14
NEK4-206ENST00000496822 DCLK1O15075 740 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 HOXC11O43248 304 aaPredicted RBP15.9■□□□□ 0.14
NEK4-206ENST00000496822 GADD45BO75293 160 aaPredicted RBP15.9■□□□□ 0.14
NEK4-206ENST00000496822 APBB3O95704 486 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 RARGP13631 454 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 HNRNPLP14866 589 aaKnown RBP eCLIP15.9■□□□□ 0.14
NEK4-206ENST00000496822 BMP6P22004 513 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 EIF2DP41214 584 aaKnown RBP15.9■□□□□ 0.14
NEK4-206ENST00000496822 KIF11P52732 1056 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 LRRC63Q05C16 580 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 CCDC6Q16204 474 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 EMC10Q5UCC4 262 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 CACNA2D4Q7Z3S7 1137 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 TMEM25Q86YD3 366 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 OTUB2Q96DC9 234 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 TMEM176AQ96HP8 235 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 FAXDC2Q96IV6 333 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 DUSP9Q99956 384 aaKnown RBP15.9■□□□□ 0.14
NEK4-206ENST00000496822 TPSD1Q9BZJ3 242 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 ARHGEF4Q9NR80 690 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 SPHK2Q9NRA0 654 aa15.9■□□□□ 0.14
NEK4-206ENST00000496822 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.9■□□□□ 0.14
NEK4-206ENST00000496822 CHMP5Q9NZZ3 219 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms