RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 EIF3EP60228 445 aaKnown RBP8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 BNC1Q01954 994 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 GPS1Q13098 491 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 LDHAL6AQ6ZMR3 332 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 GATAD2AQ86YP4 633 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 DCP2Q8IU60 420 aaKnown RBP8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 ARHGEF19Q8IW93 802 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 CEP19Q96LK0 163 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 C7orf26Q96N11 449 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 ZSCAN10Q96SZ4 725 aaPredicted RBP8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 HERC2P3Q9BVR0 1158 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 MXD3Q9BW11 206 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 BRIP1Q9BX63 1249 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 KANSL2Q9H9L4 492 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 TMEM9Q9P0T7 183 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 CDH22Q9UJ99 828 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 AGTPBP1Q9UPW5 1226 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 USTQ9Y2C2 406 aa8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 ARHGEF35A5YM69 484 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 PRR5-ARHGAP8B1AHC4 643 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 ZNF701M0R085 212 aaPredicted RBP8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 LRRN2O75325 713 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 PEX14O75381 377 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 TRIM49P0CI25 452 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 TRIM49CP0CI26 452 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 RPS6P62753 249 aaKnown RBP8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 ARHGAP8P85298 464 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 DPYSQ14117 519 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 MPP2Q14168 576 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 HERC3Q15034 1050 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 CARTPTQ16568 116 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 C5orf22Q49AR2 442 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 TTC7BQ86TV6 843 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 FAR2Q96K12 515 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 IARS2Q9NSE4 1012 aaKnown RBP8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 B3GNT3Q9Y2A9 372 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 SLC30A1Q9Y6M5 507 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 KDM3AQ9Y4C1 1321 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 A0A1W2PPW3 197 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 SNAP91O60641 907 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 ADD2P35612 726 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 CENPCQ03188 943 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 PTK7Q13308 1070 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 ZNF362Q5T0B9 420 aaPredicted RBP8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 AGAP9Q5VTM2 703 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 ZCCHC8Q6NZY4 707 aaKnown RBP8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 FAM122CQ6P4D5 195 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 UTS2BQ765I0 119 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 ATP6V0D2Q8N8Y2 350 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 FAM47BQ8NA70 645 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 PDCD6IPQ8WUM4 868 aaKnown RBP8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 SENP7Q9BQF6 1050 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 TEX13BQ9BXU2 312 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 SLC13A1Q9BZW2 595 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 CCDC90BQ9GZT6 254 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 GLT8D2Q9H1C3 349 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 C1orf21Q9H246 121 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 SIAEQ9HAT2 523 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 SLAIN2Q9P270 581 aa8.46□□□□□ -1.06
CRNKL1-205ENST00000496549 ZNF142P52746 1687 aaPredicted RBP8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 UBE4BO95155 1302 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 INO80B-WBP1J3KQ70 363 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 DNAJA2O60884 412 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 NOS1APO75052 506 aaPredicted RBP8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 USP12O75317 370 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 NELFEP18615 380 aaKnown RBP8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 SLC9A1P19634 815 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 PRDX6P30041 224 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 NIPAL4Q0D2K0 466 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 ADGRE1Q14246 886 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 DRAP1Q14919 205 aaPredicted RBP8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 NFE2Q16621 373 aaPredicted RBP8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 FAM47AQ5JRC9 791 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 C11orf63Q6NUN7 778 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 ESX1Q8N693 406 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 HTRA1Q92743 480 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 VPS33AQ96AX1 596 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 SETDB2Q96T68 719 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 EMILIN2Q9BXX0 1053 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 TP63Q9H3D4 680 aaPredicted RBP8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 DNM3Q9UQ16 869 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 POMPQ9Y244 141 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 ARHGEF15O94989 841 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 UBL4AP11441 157 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 IL10P22301 178 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 RCVRNP35243 200 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 ACADSBP45954 432 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 NME3Q13232 169 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 PTK6Q13882 451 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 ACAP2Q15057 778 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 DGKDQ16760 1214 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 FAM47CQ5HY64 1035 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 ZNF804AQ7Z570 1209 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 MIGA1Q8NAN2 632 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 RASGRP4Q8TDF6 673 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 HEMGNQ9BXL5 484 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 SNTG2Q9NY99 539 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 UBA2Q9UBT2 640 aaPredicted RBP8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 MYH6P13533 1939 aa8.45□□□□□ -1.06
CRNKL1-205ENST00000496549 A0A088AWK7 358 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms