RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 MANEALQ5VSG8 457 aa6.79□□□□□ -1.32
SF3B1-212ENST00000496458 KLHDC7AQ5VTJ3 777 aa6.79□□□□□ -1.32
SF3B1-212ENST00000496458 GALNT4Q8N4A0 578 aa6.79□□□□□ -1.32
SF3B1-212ENST00000496458 CCDC33Q8N5R6 958 aa6.79□□□□□ -1.32
SF3B1-212ENST00000496458 METTL25Q8N6Q8 603 aa6.79□□□□□ -1.32
SF3B1-212ENST00000496458 SH2D3AQ9BRG2 576 aa6.79□□□□□ -1.32
SF3B1-212ENST00000496458 TRIM36Q9NQ86 728 aa6.79□□□□□ -1.32
SF3B1-212ENST00000496458 SNX15Q9NRS6 342 aa6.79□□□□□ -1.32
SF3B1-212ENST00000496458 ASIC5Q9NY37 505 aa6.79□□□□□ -1.32
SF3B1-212ENST00000496458 POM121BA6NF01 834 aa6.78□□□□□ -1.32
SF3B1-212ENST00000496458 KIF3BO15066 747 aa6.78□□□□□ -1.32
SF3B1-212ENST00000496458 THAP12O43422 761 aa6.78□□□□□ -1.32
SF3B1-212ENST00000496458 SLC5A1P13866 664 aa6.78□□□□□ -1.32
SF3B1-212ENST00000496458 DIO1P49895 249 aa6.78□□□□□ -1.32
SF3B1-212ENST00000496458 COPB1P53618 953 aaKnown RBP6.78□□□□□ -1.32
SF3B1-212ENST00000496458 SAFBQ15424 915 aaKnown RBP eCLIP6.78□□□□□ -1.32
SF3B1-212ENST00000496458 CEP78Q5JTW2 689 aa6.78□□□□□ -1.32
SF3B1-212ENST00000496458 DENND2CQ68D51 928 aa6.78□□□□□ -1.32
SF3B1-212ENST00000496458 MZT2AQ6P582 158 aa6.78□□□□□ -1.32
SF3B1-212ENST00000496458 CLEC9AQ6UXN8 241 aa6.78□□□□□ -1.32
SF3B1-212ENST00000496458 USP49Q70CQ1 688 aa6.78□□□□□ -1.32
SF3B1-212ENST00000496458 C5orf34Q96MH7 638 aa6.78□□□□□ -1.32
SF3B1-212ENST00000496458 HEYLQ9NQ87 328 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-212ENST00000496458 MGAT4CQ9UBM8 478 aa6.78□□□□□ -1.32
SF3B1-212ENST00000496458 CAPN11Q9UMQ6 739 aa6.78□□□□□ -1.32
SF3B1-212ENST00000496458 TCRBV5S1A1TA0A578 114 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 UBE2Q2LH0YL09 131 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 APAF1O14727 1248 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 TMPRSS11DO60235 418 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 SNX2O60749 519 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 GCATO75600 419 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 USP1O94782 785 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 PRR35P0CG20 571 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 CD19P15391 556 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 YY1P25490 414 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 CERS1P27544 350 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 RBL1P28749 1068 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 FAM187BQ17R55 369 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 YTHDF3Q7Z739 585 aaKnown RBP6.77□□□□□ -1.33
SF3B1-212ENST00000496458 LRRC46Q96FV0 321 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 SEMA4CQ9C0C4 833 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 NKX1-2Q9UD57 310 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-212ENST00000496458 STEAP1Q9UHE8 339 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 VPS51Q9UID3 782 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 SLC27A6Q9Y2P4 619 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 TNFRSF18Q9Y5U5 241 aa6.77□□□□□ -1.33
SF3B1-212ENST00000496458 PPP6CO00743 305 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 ADAMTS3O15072 1205 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 PMM2O15305 246 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 TUBB4AP04350 444 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 CHRM5P08912 532 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-212ENST00000496458 APEHP13798 732 aaKnown RBP6.76□□□□□ -1.33
SF3B1-212ENST00000496458 TSHRP16473 764 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 LMO1P25800 156 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 MCM5P33992 734 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 PRIM2P49643 509 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 CASP5P51878 434 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 CATSPERGQ6ZRH7 1159 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 C8orf58Q8NAV2 365 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 ATP11CQ8NB49 1132 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 FYTTD1Q96QD9 318 aaKnown RBP6.76□□□□□ -1.33
SF3B1-212ENST00000496458 TBCBQ99426 244 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 SELENOOQ9BVL4 669 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 QTRT1Q9BXR0 403 aaKnown RBP6.76□□□□□ -1.33
SF3B1-212ENST00000496458 SLC29A3Q9BZD2 475 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 SLC25A32Q9H2D1 315 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 PDGFCQ9NRA1 345 aa6.76□□□□□ -1.33
SF3B1-212ENST00000496458 FNDC1Q4ZHG4 1894 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-212ENST00000496458 A0A087WZ62 844 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 WDR91A4D1P6 747 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 A8MVJ9 347 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 MT-CO3P00414 261 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 CYP2A6P11509 494 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-212ENST00000496458 TRIM27P14373 513 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 PHKG2P15735 406 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 KELP23276 732 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 SUPT20HL1Q3ZLR7 823 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 MTX3Q5HYI7 312 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 ZNF626Q68DY1 528 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 SLC18B1Q6NT16 456 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 NEK8Q86SG6 692 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 FSTL5Q8N475 847 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-212ENST00000496458 MAFAQ8NHW3 353 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-212ENST00000496458 ADAMTS18Q8TE60 1221 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 CCDC17Q96LX7 622 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 ZCWPW1Q9H0M4 648 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 ASAP1Q9ULH1 1129 aa6.75□□□□□ -1.33
SF3B1-212ENST00000496458 MYL3P08590 195 aa6.74□□□□□ -1.33
SF3B1-212ENST00000496458 FGFR2P21802 821 aa6.74□□□□□ -1.33
SF3B1-212ENST00000496458 ATICP31939 592 aa6.74□□□□□ -1.33
SF3B1-212ENST00000496458 GNALP38405 381 aa6.74□□□□□ -1.33
SF3B1-212ENST00000496458 STT3AP46977 705 aa6.74□□□□□ -1.33
SF3B1-212ENST00000496458 COPAP53621 1224 aa6.74□□□□□ -1.33
SF3B1-212ENST00000496458 EIF4A1P60842 406 aaKnown RBP6.74□□□□□ -1.33
SF3B1-212ENST00000496458 DEUP1Q05D60 604 aa6.74□□□□□ -1.33
SF3B1-212ENST00000496458 IFIT5Q13325 482 aaKnown RBP6.74□□□□□ -1.33
SF3B1-212ENST00000496458 ST3GAL2Q16842 350 aa6.74□□□□□ -1.33
SF3B1-212ENST00000496458 AWAT1Q58HT5 328 aa6.74□□□□□ -1.33
SF3B1-212ENST00000496458 TMEM65Q6PI78 240 aa6.74□□□□□ -1.33
SF3B1-212ENST00000496458 KSR2Q6VAB6 950 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms