RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 FUBP3Q96I24 572 aaKnown RBP eCLIP12.5□□□□□ -0.41
ATG3-209ENST00000496423 ZFRQ96KR1 1074 aaKnown RBP12.5□□□□□ -0.41
ATG3-209ENST00000496423 TIPINQ9BVW5 301 aa12.5□□□□□ -0.41
ATG3-209ENST00000496423 CCSER1Q9C0I3 900 aa12.5□□□□□ -0.41
ATG3-209ENST00000496423 OSGEPQ9NPF4 335 aa12.5□□□□□ -0.41
ATG3-209ENST00000496423 SH3BP1Q9Y3L3 701 aa12.5□□□□□ -0.41
ATG3-209ENST00000496423 PTPN13Q12923 2485 aa12.5□□□□□ -0.41
ATG3-209ENST00000496423 ATMQ13315 3056 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 HOXC11O43248 304 aaPredicted RBP12.49□□□□□ -0.41
ATG3-209ENST00000496423 PAPSS1O43252 624 aaPredicted RBP12.49□□□□□ -0.41
ATG3-209ENST00000496423 HIP1RO75146 1068 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 MBL2P11226 248 aaPredicted RBP12.49□□□□□ -0.41
ATG3-209ENST00000496423 ABCB4P21439 1286 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 ANXA13P27216 316 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 CCT6AP40227 531 aaKnown RBP12.49□□□□□ -0.41
ATG3-209ENST00000496423 PNPLA4P41247 253 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 GRIA4P48058 902 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 ZXDBP98169 803 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 NFATC3Q12968 1075 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 PDIA5Q14554 519 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 CFAP221Q4G0U5 840 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 C4orf17Q53FE4 359 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 C6orf132Q5T0Z8 1188 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 EGFLAMQ63HQ2 1017 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 JADE1Q6IE81 842 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 C4orf50Q6ZRC1 276 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 ETFBKMTQ8IXQ9 262 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 TMEM130Q8N3G9 435 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 SNRNP27Q8WVK2 155 aaKnown RBP12.49□□□□□ -0.41
ATG3-209ENST00000496423 PRCCQ92733 491 aaPredicted RBP12.49□□□□□ -0.41
ATG3-209ENST00000496423 SIPA1Q96FS4 1042 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 ZNF560Q96MR9 790 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 TRIM4Q9C037 500 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 TMLHEQ9NVH6 421 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 SMPD4Q9NXE4 827 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 USP36Q9P275 1121 aaKnown RBP12.49□□□□□ -0.41
ATG3-209ENST00000496423 DNM3Q9UQ16 869 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 CLCA2Q9UQC9 943 aa12.49□□□□□ -0.41
ATG3-209ENST00000496423 TMEM131Q92545 1883 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 NPC1O15118 1278 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 OGTO15294 1046 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 KLK10O43240 276 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 SYNCRIPO60506 623 aaKnown RBP12.48□□□□□ -0.41
ATG3-209ENST00000496423 HUS1O60921 280 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 ITGAVP06756 1048 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 ADRB2P07550 413 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 MAGEA11P43364 429 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 LIG4P49917 911 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 C21orf59P57076 290 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 UBAP2LQ14157 1087 aaKnown RBP12.48□□□□□ -0.41
ATG3-209ENST00000496423 EARS2Q5JPH6 523 aaKnown RBP12.48□□□□□ -0.41
ATG3-209ENST00000496423 FBXL19Q6PCT2 694 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 DENND5BQ6ZUT9 1274 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 TMEM86AQ8N2M4 240 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 ERLEC1Q96DZ1 483 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 SPATA17Q96L03 361 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 RNF38Q9H0F5 515 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 SLC6A17Q9H1V8 727 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 ASB7Q9H672 318 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 SPHK2Q9NRA0 654 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 DNAJC17Q9NVM6 304 aaKnown RBP12.48□□□□□ -0.41
ATG3-209ENST00000496423 DDX43Q9NXZ2 648 aaKnown RBP12.48□□□□□ -0.41
ATG3-209ENST00000496423 DPP3Q9NY33 737 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 GTF3C4Q9UKN8 822 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 KIAA1024Q9UPX6 916 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 RAD54BQ9Y620 910 aa12.48□□□□□ -0.41
ATG3-209ENST00000496423 CABIN1Q9Y6J0 2220 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 MGAQ8IWI9 3026 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 H0Y8X5 98 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 YKT6O15498 198 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 AFPP02771 609 aaKnown RBP12.47□□□□□ -0.41
ATG3-209ENST00000496423 PCSK1P29120 753 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 GRIK1P39086 918 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 TPMTP51580 245 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 NR5A1Q13285 461 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 ENOX2Q16206 610 aaKnown RBP12.47□□□□□ -0.41
ATG3-209ENST00000496423 INTS6LQ5JSJ4 861 aaKnown RBP12.47□□□□□ -0.41
ATG3-209ENST00000496423 VSTM1Q6UX27 236 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 C1orf216Q8TAB5 229 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 CCDC97Q96F63 343 aaPredicted RBP12.47□□□□□ -0.41
ATG3-209ENST00000496423 SLITRK1Q96PX8 696 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 ACOX2Q99424 681 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 CD248Q9HCU0 757 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 CD93Q9NPY3 652 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 WDR35Q9P2L0 1181 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 MAGEC2Q9UBF1 373 aaPredicted RBP12.47□□□□□ -0.41
ATG3-209ENST00000496423 TEX15Q9BXT5 2789 aa12.47□□□□□ -0.41
ATG3-209ENST00000496423 SCN1AP35498 2009 aa12.46□□□□□ -0.41
ATG3-209ENST00000496423 ZNF840PA6NDX5 716 aa12.46□□□□□ -0.41
ATG3-209ENST00000496423 KCNK3O14649 394 aa12.46□□□□□ -0.41
ATG3-209ENST00000496423 TERTO14746 1132 aaKnown RBP12.46□□□□□ -0.41
ATG3-209ENST00000496423 OR52Z1P0C646 297 aa12.46□□□□□ -0.41
ATG3-209ENST00000496423 SFTPCP11686 197 aa12.46□□□□□ -0.41
ATG3-209ENST00000496423 SCP2P22307 547 aa12.46□□□□□ -0.41
ATG3-209ENST00000496423 LHX1P48742 406 aa12.46□□□□□ -0.41
ATG3-209ENST00000496423 INHBCP55103 352 aa12.46□□□□□ -0.41
ATG3-209ENST00000496423 ERVPABLB-1P60509 514 aa12.46□□□□□ -0.41
ATG3-209ENST00000496423 E2F1Q01094 437 aa12.46□□□□□ -0.41
ATG3-209ENST00000496423 STK3Q13188 491 aa12.46□□□□□ -0.41
ATG3-209ENST00000496423 DNAJC3Q13217 504 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms