RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 BMP6P22004 513 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 FMO5P49326 533 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 PSEN1P49768 467 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 RAD23BP54727 409 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 SLC8A3P57103 927 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 GOLGA8FQ08AF8 430 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 GOLGA8DPQ0D2H9 430 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 PAK1Q13153 545 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 CCDC40Q4G0X9 1142 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 ZNF394Q53GI3 561 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 PPP1R26Q5T8A7 1209 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-213ENST00000496347 ARHGAP17Q68EM7 881 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 KLHL10Q6JEL2 608 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 KLHDC10Q6PID8 442 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 CCDC186Q7Z3E2 898 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 TADA2BQ86TJ2 420 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 SLC4A11Q8NBS3 891 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 NELFBQ8WX92 580 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 TMEM176AQ96HP8 235 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 DUSP16Q9BY84 665 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 LINC00597Q9H2U6 94 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 NCDNQ9UBB6 729 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 CTNND2Q9UQB3 1225 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 SH3BP1Q9Y3L3 701 aa16.59■□□□□ 0.25
HDAC4-213ENST00000496347 CCDC163A0A0D9SF12 145 aa16.58■□□□□ 0.24
HDAC4-213ENST00000496347 GNA14O95837 355 aa16.58■□□□□ 0.24
HDAC4-213ENST00000496347 ACO1P21399 889 aaKnown RBP16.58■□□□□ 0.24
HDAC4-213ENST00000496347 GALK1P51570 392 aa16.58■□□□□ 0.24
HDAC4-213ENST00000496347 KIF11P52732 1056 aa16.58■□□□□ 0.24
HDAC4-213ENST00000496347 CETN1Q12798 172 aa16.58■□□□□ 0.24
HDAC4-213ENST00000496347 DHCR24Q15392 516 aa16.58■□□□□ 0.24
HDAC4-213ENST00000496347 GAB4Q2WGN9 574 aa16.58■□□□□ 0.24
HDAC4-213ENST00000496347 NAIF1Q69YI7 327 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-213ENST00000496347 JAKMIP2Q96AA8 810 aa16.58■□□□□ 0.24
HDAC4-213ENST00000496347 HEXIM2Q96MH2 286 aaKnown RBP16.58■□□□□ 0.24
HDAC4-213ENST00000496347 CDK5RAP1Q96SZ6 601 aaKnown RBP16.58■□□□□ 0.24
HDAC4-213ENST00000496347 C2orf42Q9NWW7 574 aa16.58■□□□□ 0.24
HDAC4-213ENST00000496347 CHMP5Q9NZZ3 219 aa16.58■□□□□ 0.24
HDAC4-213ENST00000496347 CHORDC1Q9UHD1 332 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-213ENST00000496347 RAB23Q9ULC3 237 aa16.58■□□□□ 0.24
HDAC4-213ENST00000496347 EML5Q05BV3 1969 aa16.58■□□□□ 0.24
HDAC4-213ENST00000496347 DNAH14Q0VDD8 3507 aa16.57■□□□□ 0.24
HDAC4-213ENST00000496347 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.57■□□□□ 0.24
HDAC4-213ENST00000496347 PPP1R3GB7ZBB8 358 aa16.57■□□□□ 0.24
HDAC4-213ENST00000496347 P4HA2O15460 535 aa16.57■□□□□ 0.24
HDAC4-213ENST00000496347 ADH5P11766 374 aa16.57■□□□□ 0.24
HDAC4-213ENST00000496347 OPRD1P41143 372 aa16.57■□□□□ 0.24
HDAC4-213ENST00000496347 FNTBP49356 437 aa16.57■□□□□ 0.24
HDAC4-213ENST00000496347 LAIR1Q6GTX8 287 aa16.57■□□□□ 0.24
HDAC4-213ENST00000496347 ISM2Q6H9L7 571 aa16.57■□□□□ 0.24
HDAC4-213ENST00000496347 PKN3Q6P5Z2 889 aa16.57■□□□□ 0.24
HDAC4-213ENST00000496347 WDR5BQ86VZ2 330 aa16.57■□□□□ 0.24
HDAC4-213ENST00000496347 EZH1Q92800 747 aaPredicted RBP16.57■□□□□ 0.24
HDAC4-213ENST00000496347 TATDN2Q93075 761 aa16.57■□□□□ 0.24
HDAC4-213ENST00000496347 FBRSL1Q9HCM7 1045 aaKnown RBP16.57■□□□□ 0.24
HDAC4-213ENST00000496347 GMEB2Q9UKD1 530 aa16.57■□□□□ 0.24
HDAC4-213ENST00000496347 SLC8A2Q9UPR5 921 aa16.57■□□□□ 0.24
HDAC4-213ENST00000496347 USP3Q9Y6I4 520 aa16.57■□□□□ 0.24
HDAC4-213ENST00000496347 BIN1O00499 593 aa16.56■□□□□ 0.24
HDAC4-213ENST00000496347 SCAMP3O14828 347 aaKnown RBP16.56■□□□□ 0.24
HDAC4-213ENST00000496347 HOXC11O43248 304 aaPredicted RBP16.56■□□□□ 0.24
HDAC4-213ENST00000496347 ATP5C1P36542 298 aaKnown RBP16.56■□□□□ 0.24
HDAC4-213ENST00000496347 BCAT1P54687 386 aa16.56■□□□□ 0.24
HDAC4-213ENST00000496347 MARSP56192 900 aaKnown RBP16.56■□□□□ 0.24
HDAC4-213ENST00000496347 DMWDQ09019 674 aa16.56■□□□□ 0.24
HDAC4-213ENST00000496347 SYT13Q7L8C5 426 aa16.56■□□□□ 0.24
HDAC4-213ENST00000496347 ADGRG2Q8IZP9 1017 aa16.56■□□□□ 0.24
HDAC4-213ENST00000496347 ZNF276Q8N554 614 aa16.56■□□□□ 0.24
HDAC4-213ENST00000496347 CAMKK1Q8N5S9 505 aa16.56■□□□□ 0.24
HDAC4-213ENST00000496347 GPR161Q8N6U8 529 aaKnown RBP16.56■□□□□ 0.24
HDAC4-213ENST00000496347 ANKRD52Q8NB46 1076 aa16.56■□□□□ 0.24
HDAC4-213ENST00000496347 RPLP0P6Q8NHW5 317 aa16.56■□□□□ 0.24
HDAC4-213ENST00000496347 NT5C1BQ96P26 610 aa16.56■□□□□ 0.24
HDAC4-213ENST00000496347 UBXN6Q9BZV1 441 aa16.56■□□□□ 0.24
HDAC4-213ENST00000496347 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.56■□□□□ 0.24
HDAC4-213ENST00000496347 CLIC5Q9NZA1 410 aa16.56■□□□□ 0.24
HDAC4-213ENST00000496347 A0A1W2PQH9 124 aa16.55■□□□□ 0.24
HDAC4-213ENST00000496347 RALAP11233 206 aa16.55■□□□□ 0.24
HDAC4-213ENST00000496347 PGFP49763 221 aa16.55■□□□□ 0.24
HDAC4-213ENST00000496347 GOLGA7BQ2TAP0 167 aa16.55■□□□□ 0.24
HDAC4-213ENST00000496347 PREPLQ4J6C6 727 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-213ENST00000496347 SGO2Q562F6 1265 aa16.55■□□□□ 0.24
HDAC4-213ENST00000496347 HEATR6Q6AI08 1181 aaKnown RBP16.55■□□□□ 0.24
HDAC4-213ENST00000496347 RHBDF2Q6PJF5 856 aa16.55■□□□□ 0.24
HDAC4-213ENST00000496347 TRIM59Q8IWR1 403 aa16.55■□□□□ 0.24
HDAC4-213ENST00000496347 BBS7Q8IWZ6 715 aa16.55■□□□□ 0.24
HDAC4-213ENST00000496347 ARHGAP18Q8N392 663 aa16.55■□□□□ 0.24
HDAC4-213ENST00000496347 UBR7Q8N806 425 aa16.55■□□□□ 0.24
HDAC4-213ENST00000496347 OSER1Q9NX31 292 aa16.55■□□□□ 0.24
HDAC4-213ENST00000496347 DNMT3LQ9UJW3 386 aa16.55■□□□□ 0.24
HDAC4-213ENST00000496347 NAGPAQ9UK23 515 aa16.55■□□□□ 0.24
HDAC4-213ENST00000496347 LSM7Q9UK45 103 aaKnown RBP16.55■□□□□ 0.24
HDAC4-213ENST00000496347 MYO18AQ92614 2054 aaKnown RBP16.55■□□□□ 0.24
HDAC4-213ENST00000496347 RALGAPA1Q6GYQ0 2036 aa16.55■□□□□ 0.24
HDAC4-213ENST00000496347 FGFR1OPO95684 399 aaKnown RBP16.54■□□□□ 0.24
HDAC4-213ENST00000496347 APBB3O95704 486 aa16.54■□□□□ 0.24
HDAC4-213ENST00000496347 PAEPP09466 180 aa16.54■□□□□ 0.24
HDAC4-213ENST00000496347 ANP32AP39687 249 aaKnown RBP16.54■□□□□ 0.24
HDAC4-213ENST00000496347 GCNT1Q02742 428 aa16.54■□□□□ 0.24
HDAC4-213ENST00000496347 GAD2Q05329 585 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms