RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 ARFGAP1Q8N6T3 406 aa25.5■■□□□ 1.67
PPP1R3F-205ENST00000495799 CENPIQ92674 756 aaPredicted RBP25.5■■□□□ 1.67
PPP1R3F-205ENST00000495799 ZWILCHQ9H900 591 aa25.5■■□□□ 1.67
PPP1R3F-205ENST00000495799 CDY1Q9Y6F8 540 aa25.5■■□□□ 1.67
PPP1R3F-205ENST00000495799 FSCN2O14926 492 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 TCF4P15884 667 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 SULT1E1P49888 294 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 SLC5A3P53794 718 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 CREMQ03060 361 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 DCAF6Q58WW2 860 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 C8orf74Q6P047 294 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 AADACL2Q6P093 401 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 BEND5Q7L4P6 421 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 TEKT4Q8WW24 435 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 RUNDC3BQ96NL0 473 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 PGLYRP2Q96PD5 576 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 SLITRK1Q96PX8 696 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 C11orf84Q9BUA3 381 aaPredicted RBP25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 VN1R3Q9BXE9 311 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 AP1M1Q9BXS5 423 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 FBXO44Q9H4M3 255 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 PCSK1NQ9UHG2 260 aa25.49■■□□□ 1.67
PPP1R3F-205ENST00000495799 TARSL2A2RTX5 802 aaKnown RBP25.48■■□□□ 1.67
PPP1R3F-205ENST00000495799 MCM3P25205 808 aa25.48■■□□□ 1.67
PPP1R3F-205ENST00000495799 RABGGTBP53611 331 aa25.48■■□□□ 1.67
PPP1R3F-205ENST00000495799 EPHB4P54760 987 aa25.48■■□□□ 1.67
PPP1R3F-205ENST00000495799 RPL10AP62906 217 aaKnown RBP25.48■■□□□ 1.67
PPP1R3F-205ENST00000495799 NAA30Q147X3 362 aaPredicted RBP25.48■■□□□ 1.67
PPP1R3F-205ENST00000495799 NUP93Q8N1F7 819 aa25.48■■□□□ 1.67
PPP1R3F-205ENST00000495799 RUBCNQ92622 972 aa25.48■■□□□ 1.67
PPP1R3F-205ENST00000495799 CEP295NLQ96MC4 621 aa25.48■■□□□ 1.67
PPP1R3F-205ENST00000495799 RAD9AQ99638 391 aa25.48■■□□□ 1.67
PPP1R3F-205ENST00000495799 OSBPL8Q9BZF1 889 aa25.48■■□□□ 1.67
PPP1R3F-205ENST00000495799 COMMD8Q9NX08 183 aa25.48■■□□□ 1.67
PPP1R3F-205ENST00000495799 SSX2IPQ9Y2D8 614 aa25.48■■□□□ 1.67
PPP1R3F-205ENST00000495799 LRRD1A4D1F6 860 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 TNFRSF10BO14763 440 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 SYN1P17600 705 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 IL1R2P27930 398 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 RNF19BQ6ZMZ0 732 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 HERC6Q8IVU3 1022 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 NDRG1Q92597 394 aaKnown RBP25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 KRT12Q99456 494 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 SLITRK6Q9H5Y7 841 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 HOMER3Q9NSC5 361 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 YJEFN3A6XGL0 299 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 E7ENQ6 273 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 RTN3O95197 1032 aaPredicted RBP25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 RHOXF2BP0C7M4 288 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 HAPLN1P10915 354 aaPredicted RBP25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 ROR1Q01973 937 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 MGAT5BQ3V5L5 792 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 TFDP3Q5H9I0 405 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 SCYL2Q6P3W7 929 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 RSPO2Q6UXX9 243 aaPredicted RBP25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 SPOCD1Q6ZMY3 1216 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 MAP7D3Q8IWC1 876 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 ARHGAP18Q8N392 663 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 ATAD1Q8NBU5 361 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 KCTD6Q8NC69 237 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 CMASQ8NFW8 434 aaPredicted RBP25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 CCDC26Q8TAB7 109 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 NT5C3BQ969T7 300 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 RNF25Q96BH1 459 aaPredicted RBP25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 SPATA17Q96L03 361 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 NPY6RQ99463 290 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 RHOXF2Q9BQY4 288 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 CXXC1Q9P0U4 656 aaPredicted RBP25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 HSFX1Q9UBD0 423 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 ZMYND8Q9ULU4 1186 aaPredicted RBP25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 EFR3BQ9Y2G0 817 aa25.47■■□□□ 1.67
PPP1R3F-205ENST00000495799 PHF2O75151 1096 aa25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 TJP3O95049 919 aa25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 RALAP11233 206 aa25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 ATP2A2P16615 1042 aaKnown RBP25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 RDXP35241 583 aaKnown RBP25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 HDAC4P56524 1084 aa25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 SMTNL2Q2TAL5 461 aa25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 ATP13A4Q4VNC1 1196 aa25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 SH3PXD2AQ5TCZ1 1133 aa25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 TPGS2Q68CL5 300 aa25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 TXNRD3NBQ6F5E7 133 aa25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 SP7Q8TDD2 431 aaPredicted RBP25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 HSPH1Q92598 858 aa25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 CLP1Q92989 425 aaKnown RBP25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 TMEM51Q9NW97 253 aa25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 AFF4Q9UHB7 1163 aaKnown RBP25.46■■□□□ 1.67
PPP1R3F-205ENST00000495799 C2CD2LO14523 706 aa25.45■■□□□ 1.66
PPP1R3F-205ENST00000495799 MDM4O15151 490 aa25.45■■□□□ 1.66
PPP1R3F-205ENST00000495799 TLL1O43897 1013 aa25.45■■□□□ 1.66
PPP1R3F-205ENST00000495799 ENDOD1O94919 500 aa25.45■■□□□ 1.66
PPP1R3F-205ENST00000495799 RARAP10276 462 aa25.45■■□□□ 1.66
PPP1R3F-205ENST00000495799 NCAM1P13591 858 aa25.45■■□□□ 1.66
PPP1R3F-205ENST00000495799 KDELR1P24390 212 aa25.45■■□□□ 1.66
PPP1R3F-205ENST00000495799 CHRNA3P32297 505 aa25.45■■□□□ 1.66
PPP1R3F-205ENST00000495799 OR1D2P34982 312 aa25.45■■□□□ 1.66
PPP1R3F-205ENST00000495799 TUFMP49411 452 aaKnown RBP25.45■■□□□ 1.66
PPP1R3F-205ENST00000495799 PDK2Q15119 407 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms