RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 IFRD2Q12894 506 aaPredicted RBP18.63■□□□□ 0.57
TMEM53-209ENST00000495630 TMEM25Q86YD3 366 aa18.63■□□□□ 0.57
TMEM53-209ENST00000495630 GLIS3Q8NEA6 775 aa18.63■□□□□ 0.57
TMEM53-209ENST00000495630 ZNF507Q8TCN5 953 aa18.63■□□□□ 0.57
TMEM53-209ENST00000495630 KCNK16Q96T55 309 aa18.63■□□□□ 0.57
TMEM53-209ENST00000495630 GTPBP2Q9BX10 602 aaKnown RBP18.63■□□□□ 0.57
TMEM53-209ENST00000495630 DPEP3Q9H4B8 488 aa18.63■□□□□ 0.57
TMEM53-209ENST00000495630 KLK13Q9UKR3 277 aa18.63■□□□□ 0.57
TMEM53-209ENST00000495630 SPEGQ15772 3267 aa18.63■□□□□ 0.57
TMEM53-209ENST00000495630 PTPRDP23468 1912 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 ASPMQ8IZT6 3477 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 ARHGAP33O14559 1287 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 HOXB3P14651 431 aaPredicted RBP18.62■□□□□ 0.57
TMEM53-209ENST00000495630 CEBPZQ03701 1054 aaKnown RBP18.62■□□□□ 0.57
TMEM53-209ENST00000495630 TRPC3Q13507 836 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 SLC39A14Q15043 492 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 C10orf76Q5T2E6 689 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 SDE2Q6IQ49 451 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 BBS7Q8IWZ6 715 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 DEFB119Q8N690 84 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 TERB1Q8NA31 727 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 SCAMP5Q8TAC9 235 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 CGRRF1Q99675 332 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 TNMDQ9H2S6 317 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 ATXN2Q99700 1313 aaKnown RBP18.62■□□□□ 0.57
TMEM53-209ENST00000495630 CACNA1EQ15878 2313 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 BAHCC1Q9P281 2608 aa18.62■□□□□ 0.57
TMEM53-209ENST00000495630 PI4KAP42356 2102 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 HELZP42694 1942 aaKnown RBP18.61■□□□□ 0.57
TMEM53-209ENST00000495630 ATP8B3O60423 1300 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 A0A1W2PQD8 194 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 A0A1W2PQF6 199 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 SYPP08247 313 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 ZDHHC11BP0C7U3 371 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 HOXB2P14652 356 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 MYL6P60660 151 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 AMPD3Q01432 767 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 RING1Q06587 406 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 CYP24A1Q07973 514 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 SLC14A1Q13336 389 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 CUL4AQ13619 759 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 ZNF423Q2M1K9 1284 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 ANO4Q32M45 955 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 FAM173BQ6P4H8 233 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 EPM2AIP1Q7L775 607 aaPredicted RBP18.61■□□□□ 0.57
TMEM53-209ENST00000495630 PDILTQ8N807 584 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 ZNF516Q92618 1163 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 HPS3Q969F9 1004 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 SYAP1Q96A49 352 aaPredicted RBP18.61■□□□□ 0.57
TMEM53-209ENST00000495630 CCDC127Q96BQ5 260 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 XYLT2Q9H1B5 865 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 UPF2Q9HAU5 1272 aaKnown RBP18.61■□□□□ 0.57
TMEM53-209ENST00000495630 FSCN3Q9NQT6 498 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 AGPAT3Q9NRZ7 376 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 DNAAF2Q9NVR5 837 aaKnown RBP18.61■□□□□ 0.57
TMEM53-209ENST00000495630 KBTBD4Q9NVX7 518 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 CALCOCO1Q9P1Z2 691 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 NXF1Q9UBU9 619 aaKnown RBP18.61■□□□□ 0.57
TMEM53-209ENST00000495630 HCN2Q9UL51 889 aa18.61■□□□□ 0.57
TMEM53-209ENST00000495630 IGHV1OR15-9A0A0B4J2B8 117 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 FAM92AA1XBS5 289 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 TGFB1I1O43294 461 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 CD59P13987 128 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 PAQR9Q6ZVX9 377 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 HTR3DQ70Z44 454 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 CHCHD4Q8N4Q1 142 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 MINDY1Q8N5J2 469 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 XXYLT1Q8NBI6 393 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 ZNF419Q96HQ0 510 aaPredicted RBP18.6■□□□□ 0.57
TMEM53-209ENST00000495630 TNIP3Q96KP6 325 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 TRIM9Q9C026 710 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 CUEDC2Q9H467 287 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 FAM124BQ9H5Z6 455 aaPredicted RBP18.6■□□□□ 0.57
TMEM53-209ENST00000495630 CCSER2Q9H7U1 834 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 VRTNQ9H8Y1 702 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 DMAP1Q9NPF5 467 aaPredicted RBP18.6■□□□□ 0.57
TMEM53-209ENST00000495630 LHX6Q9UPM6 363 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 MYO18AQ92614 2054 aaKnown RBP18.6■□□□□ 0.57
TMEM53-209ENST00000495630 ZFYVE26Q68DK2 2539 aa18.6■□□□□ 0.57
TMEM53-209ENST00000495630 MYOFQ9NZM1 2061 aa18.59■□□□□ 0.57
TMEM53-209ENST00000495630 SLC5A3P53794 718 aa18.59■□□□□ 0.57
TMEM53-209ENST00000495630 FAM193AP78312 1265 aa18.59■□□□□ 0.57
TMEM53-209ENST00000495630 GRAMD4Q6IC98 578 aa18.59■□□□□ 0.57
TMEM53-209ENST00000495630 CNNM4Q6P4Q7 775 aa18.59■□□□□ 0.57
TMEM53-209ENST00000495630 RAB44Q7Z6P3 723 aaPredicted RBP18.59■□□□□ 0.57
TMEM53-209ENST00000495630 MIB1Q86YT6 1006 aa18.59■□□□□ 0.57
TMEM53-209ENST00000495630 SLC41A1Q8IVJ1 513 aa18.59■□□□□ 0.57
TMEM53-209ENST00000495630 TRIML1Q8N9V2 468 aa18.59■□□□□ 0.57
TMEM53-209ENST00000495630 IPO4Q8TEX9 1081 aaKnown RBP18.59■□□□□ 0.57
TMEM53-209ENST00000495630 XPO6Q96QU8 1125 aaKnown RBP18.59■□□□□ 0.57
TMEM53-209ENST00000495630 MED10Q9BTT4 135 aa18.59■□□□□ 0.57
TMEM53-209ENST00000495630 NACA2Q9H009 215 aa18.59■□□□□ 0.57
TMEM53-209ENST00000495630 CD248Q9HCU0 757 aa18.59■□□□□ 0.57
TMEM53-209ENST00000495630 WDR35Q9P2L0 1181 aa18.59■□□□□ 0.57
TMEM53-209ENST00000495630 DMXL2Q8TDJ6 3036 aa18.59■□□□□ 0.57
TMEM53-209ENST00000495630 AKAP13Q12802 2813 aa18.59■□□□□ 0.57
TMEM53-209ENST00000495630 TRIM24O15164 1050 aa18.58■□□□□ 0.56
TMEM53-209ENST00000495630 CLIC2O15247 247 aa18.58■□□□□ 0.56
TMEM53-209ENST00000495630 PHACTR2O75167 634 aa18.58■□□□□ 0.56
TMEM53-209ENST00000495630 CAPNS1P04632 268 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms