RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 NPY5RQ15761 445 aa5.04□□□□□ -1.6
SRRM1-219ENST00000495561 UBAP2Q5T6F2 1119 aaKnown RBP5.04□□□□□ -1.6
SRRM1-219ENST00000495561 IFIT1BQ5T764 474 aaKnown RBP5.04□□□□□ -1.6
SRRM1-219ENST00000495561 VSTM1Q6UX27 236 aa5.04□□□□□ -1.6
SRRM1-219ENST00000495561 PELI3Q8N2H9 469 aa5.04□□□□□ -1.6
SRRM1-219ENST00000495561 DIS3LQ8TF46 1054 aaKnown RBP5.04□□□□□ -1.6
SRRM1-219ENST00000495561 WDYHV1Q96HA8 205 aa5.04□□□□□ -1.6
SRRM1-219ENST00000495561 TRIM5Q9C035 493 aa5.04□□□□□ -1.6
SRRM1-219ENST00000495561 SMURF2Q9HAU4 748 aa5.04□□□□□ -1.6
SRRM1-219ENST00000495561 ZBTB40Q9NUA8 1239 aa5.04□□□□□ -1.6
SRRM1-219ENST00000495561 MGAT4CQ9UBM8 478 aa5.04□□□□□ -1.6
SRRM1-219ENST00000495561 IP6K2Q9UHH9 426 aa5.04□□□□□ -1.6
SRRM1-219ENST00000495561 CECR2Q9BXF3 1484 aa5.04□□□□□ -1.6
SRRM1-219ENST00000495561 TMPRSS11DO60235 418 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 SRGAP2O75044 1071 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 KITP10721 976 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 NCLP19338 710 aaKnown RBP5.03□□□□□ -1.6
SRRM1-219ENST00000495561 MTHFSP49914 203 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 MTX1Q13505 466 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 SLC9C1Q4G0N8 1177 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 BRDTQ58F21 947 aaPredicted RBP5.03□□□□□ -1.6
SRRM1-219ENST00000495561 CC2D1BQ5T0F9 858 aaKnown RBP5.03□□□□□ -1.6
SRRM1-219ENST00000495561 DCAF12L1Q5VU92 463 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 ZNF549Q6P9A3 640 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 ZDHHC24Q6UX98 284 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 DENND1CQ8IV53 801 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 XPNPEP3Q9NQH7 507 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 GABBR1Q9UBS5 961 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 MAFFQ9ULX9 164 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 ANKRD6Q9Y2G4 727 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 CC2D2AQ9P2K1 1620 aa5.03□□□□□ -1.6
SRRM1-219ENST00000495561 A0A1W2PPL8 197 aa5.02□□□□□ -1.61
SRRM1-219ENST00000495561 TBC1D4O60343 1298 aa5.02□□□□□ -1.61
SRRM1-219ENST00000495561 TIAL1Q01085 375 aaKnown RBP eCLIP5.02□□□□□ -1.61
SRRM1-219ENST00000495561 CFHR3Q02985 330 aa5.02□□□□□ -1.61
SRRM1-219ENST00000495561 SLC14A1Q13336 389 aa5.02□□□□□ -1.61
SRRM1-219ENST00000495561 RAB32Q13637 225 aa5.02□□□□□ -1.61
SRRM1-219ENST00000495561 LVRNQ6Q4G3 990 aa5.02□□□□□ -1.61
SRRM1-219ENST00000495561 KCTD20Q7Z5Y7 419 aa5.02□□□□□ -1.61
SRRM1-219ENST00000495561 UBE2Q1Q7Z7E8 422 aa5.02□□□□□ -1.61
SRRM1-219ENST00000495561 DAAM2Q86T65 1068 aa5.02□□□□□ -1.61
SRRM1-219ENST00000495561 MMP21Q8N119 569 aa5.02□□□□□ -1.61
SRRM1-219ENST00000495561 MPLKIPQ8TAP9 179 aa5.02□□□□□ -1.61
SRRM1-219ENST00000495561 THOC3Q96J01 351 aaKnown RBP5.02□□□□□ -1.61
SRRM1-219ENST00000495561 ZMAT3Q9HA38 289 aaKnown RBP5.02□□□□□ -1.61
SRRM1-219ENST00000495561 DNMT3BQ9UBC3 853 aaKnown RBP5.02□□□□□ -1.61
SRRM1-219ENST00000495561 PROCRQ9UNN8 238 aa5.02□□□□□ -1.61
SRRM1-219ENST00000495561 EIF4G1Q04637 1599 aaKnown RBP5.02□□□□□ -1.61
SRRM1-219ENST00000495561 H3BML4 177 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 CLIC1O00299 241 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 CD3EAPO15446 510 aaKnown RBP5.01□□□□□ -1.61
SRRM1-219ENST00000495561 AP1G1O43747 822 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 UBXN7O94888 489 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 RASAL1O95294 804 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 TNFRSF1BP20333 461 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 HSF1Q00613 529 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 MFSD13AQ14CX5 517 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 ZNF750Q32MQ0 723 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 CACHD1Q5VU97 1274 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 DAB2IPQ5VWQ8 1189 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 C16orf71Q8IYS4 520 aaPredicted RBP5.01□□□□□ -1.61
SRRM1-219ENST00000495561 OR56A3Q8NH54 315 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 WIPF2Q8TF74 440 aaPredicted RBP5.01□□□□□ -1.61
SRRM1-219ENST00000495561 MAML1Q92585 1016 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 EDC3Q96F86 508 aaKnown RBP5.01□□□□□ -1.61
SRRM1-219ENST00000495561 KAZALD1Q96I82 304 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 ZBTB45Q96K62 511 aaPredicted RBP5.01□□□□□ -1.61
SRRM1-219ENST00000495561 CTAGE1Q96RT6 745 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 PCDH12Q9NPG4 1184 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 TRIM36Q9NQ86 728 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 HOMER2Q9NSB8 354 aa5.01□□□□□ -1.61
SRRM1-219ENST00000495561 EN2P19622 333 aaPredicted RBP5□□□□□ -1.61
SRRM1-219ENST00000495561 MCM5P33992 734 aa5□□□□□ -1.61
SRRM1-219ENST00000495561 CDKN2AP42771 156 aaKnown RBP5□□□□□ -1.61
SRRM1-219ENST00000495561 NEK2P51955 445 aa5□□□□□ -1.61
SRRM1-219ENST00000495561 STIM1Q13586 685 aa5□□□□□ -1.61
SRRM1-219ENST00000495561 INSCQ1MX18 579 aa5□□□□□ -1.61
SRRM1-219ENST00000495561 KRT78Q8N1N4 520 aa5□□□□□ -1.61
SRRM1-219ENST00000495561 PPP1R35Q8TAP8 253 aa5□□□□□ -1.61
SRRM1-219ENST00000495561 HOOK2Q96ED9 719 aa5□□□□□ -1.61
SRRM1-219ENST00000495561 PPP1R9BQ96SB3 815 aa5□□□□□ -1.61
SRRM1-219ENST00000495561 ZNF518BQ9C0D4 1074 aa5□□□□□ -1.61
SRRM1-219ENST00000495561 MLXIPQ9HAP2 919 aa5□□□□□ -1.61
SRRM1-219ENST00000495561 AASDHPPTQ9NRN7 309 aa5□□□□□ -1.61
SRRM1-219ENST00000495561 COL4A3BPQ9Y5P4 624 aa5□□□□□ -1.61
SRRM1-219ENST00000495561 SHROOM4Q9ULL8 1493 aa5□□□□□ -1.61
SRRM1-219ENST00000495561 EXOC5O00471 708 aa4.99□□□□□ -1.61
SRRM1-219ENST00000495561 RGS10O43665 173 aa4.99□□□□□ -1.61
SRRM1-219ENST00000495561 HGFP14210 728 aa4.99□□□□□ -1.61
SRRM1-219ENST00000495561 TACR3P29371 465 aa4.99□□□□□ -1.61
SRRM1-219ENST00000495561 CPA2P48052 419 aa4.99□□□□□ -1.61
SRRM1-219ENST00000495561 COL23A1Q86Y22 540 aaPredicted RBP4.99□□□□□ -1.61
SRRM1-219ENST00000495561 CHPFQ8IZ52 775 aa4.99□□□□□ -1.61
SRRM1-219ENST00000495561 C12orf76Q8N812 135 aaPredicted RBP4.99□□□□□ -1.61
SRRM1-219ENST00000495561 SPSB4Q96A44 273 aa4.99□□□□□ -1.61
SRRM1-219ENST00000495561 HIC2Q96JB3 615 aa4.99□□□□□ -1.61
SRRM1-219ENST00000495561 ATP6V0A4Q9HBG4 840 aa4.99□□□□□ -1.61
SRRM1-219ENST00000495561 SEMA4BQ9NPR2 832 aaPredicted RBP4.99□□□□□ -1.61
SRRM1-219ENST00000495561 A1CFQ9NQ94 594 aaKnown RBP4.99□□□□□ -1.61
SRRM1-219ENST00000495561 ZNF112Q9UJU3 913 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms