RNA–Protein interactions for RNA: ENST00000495423.1

SIMC1-208, Transcript of SUMO interacting motifs containing 1, humanhuman

TSL 2

Gene SIMC1, Length 913 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-208ENST00000495423 ARHGEF4Q9NR80 690 aa24.58■■□□□ 1.53
SIMC1-208ENST00000495423 PANK4Q9NVE7 773 aa24.58■■□□□ 1.53
SIMC1-208ENST00000495423 SMPD4Q9NXE4 827 aa24.58■■□□□ 1.53
SIMC1-208ENST00000495423 BCCIPQ9P287 314 aaKnown RBP eCLIP24.58■■□□□ 1.53
SIMC1-208ENST00000495423 CFAP97Q9P2B7 532 aa24.58■■□□□ 1.53
SIMC1-208ENST00000495423 MSRB2Q9Y3D2 182 aa24.58■■□□□ 1.53
SIMC1-208ENST00000495423 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.57■■□□□ 1.52
SIMC1-208ENST00000495423 TNNC2P02585 160 aa24.57■■□□□ 1.52
SIMC1-208ENST00000495423 PDGFRBP09619 1106 aa24.57■■□□□ 1.52
SIMC1-208ENST00000495423 ADH5P11766 374 aa24.57■■□□□ 1.52
SIMC1-208ENST00000495423 HOXB3P14651 431 aaPredicted RBP24.57■■□□□ 1.52
SIMC1-208ENST00000495423 ASIC1P78348 528 aa24.57■■□□□ 1.52
SIMC1-208ENST00000495423 DUOXA2Q1HG44 320 aa24.57■■□□□ 1.52
SIMC1-208ENST00000495423 EMC10Q5UCC4 262 aa24.57■■□□□ 1.52
SIMC1-208ENST00000495423 PHTF2Q8N3S3 785 aa24.57■■□□□ 1.52
SIMC1-208ENST00000495423 NOC3LQ8WTT2 800 aaKnown RBP24.57■■□□□ 1.52
SIMC1-208ENST00000495423 HMGB4Q8WW32 186 aa24.57■■□□□ 1.52
SIMC1-208ENST00000495423 CCDC47Q96A33 483 aaKnown RBP24.57■■□□□ 1.52
SIMC1-208ENST00000495423 GTPBP4Q9BZE4 634 aaKnown RBP24.57■■□□□ 1.52
SIMC1-208ENST00000495423 TBC1D14Q9P2M4 693 aa24.57■■□□□ 1.52
SIMC1-208ENST00000495423 HYAL3O43820 417 aaPredicted RBP24.56■■□□□ 1.52
SIMC1-208ENST00000495423 IDEP14735 1019 aa24.56■■□□□ 1.52
SIMC1-208ENST00000495423 PTMSP20962 102 aa24.56■■□□□ 1.52
SIMC1-208ENST00000495423 AFMP43652 599 aa24.56■■□□□ 1.52
SIMC1-208ENST00000495423 EHHADHQ08426 723 aa24.56■■□□□ 1.52
SIMC1-208ENST00000495423 TAF10Q12962 218 aa24.56■■□□□ 1.52
SIMC1-208ENST00000495423 KIAA1211LQ6NV74 962 aa24.56■■□□□ 1.52
SIMC1-208ENST00000495423 STXBP4Q6ZWJ1 553 aa24.56■■□□□ 1.52
SIMC1-208ENST00000495423 SLITRK1Q96PX8 696 aa24.56■■□□□ 1.52
SIMC1-208ENST00000495423 NME7Q9Y5B8 376 aa24.56■■□□□ 1.52
SIMC1-208ENST00000495423 TCRBV21S2A2A0A5A6 115 aa24.55■■□□□ 1.52
SIMC1-208ENST00000495423 E2F8A0AVK6 867 aa24.55■■□□□ 1.52
SIMC1-208ENST00000495423 ZNF233A6NK53 670 aa24.55■■□□□ 1.52
SIMC1-208ENST00000495423 SCAMP3O14828 347 aaKnown RBP24.55■■□□□ 1.52
SIMC1-208ENST00000495423 TACC1O75410 805 aa24.55■■□□□ 1.52
SIMC1-208ENST00000495423 PRPF6O94906 941 aaKnown RBP24.55■■□□□ 1.52
SIMC1-208ENST00000495423 FAM163BP0C2L3 166 aa24.55■■□□□ 1.52
SIMC1-208ENST00000495423 ITPKAP23677 461 aa24.55■■□□□ 1.52
SIMC1-208ENST00000495423 KDSRQ06136 332 aa24.55■■□□□ 1.52
SIMC1-208ENST00000495423 MDH1BQ5I0G3 518 aa24.55■■□□□ 1.52
SIMC1-208ENST00000495423 TDRD10Q5VZ19 366 aaKnown RBP24.55■■□□□ 1.52
SIMC1-208ENST00000495423 WDR49Q8IV35 697 aa24.55■■□□□ 1.52
SIMC1-208ENST00000495423 KCNV2Q8TDN2 545 aa24.55■■□□□ 1.52
SIMC1-208ENST00000495423 OTUB2Q96DC9 234 aa24.55■■□□□ 1.52
SIMC1-208ENST00000495423 MMS19Q96T76 1030 aa24.55■■□□□ 1.52
SIMC1-208ENST00000495423 TMEM30AQ9NV96 361 aa24.55■■□□□ 1.52
SIMC1-208ENST00000495423 ABL1P00519 1130 aa24.54■■□□□ 1.52
SIMC1-208ENST00000495423 MBL2P11226 248 aaPredicted RBP24.54■■□□□ 1.52
SIMC1-208ENST00000495423 DPYDQ12882 1025 aa24.54■■□□□ 1.52
SIMC1-208ENST00000495423 CUL4BQ13620 913 aa24.54■■□□□ 1.52
SIMC1-208ENST00000495423 LY6G5CQ5SRR4 150 aa24.54■■□□□ 1.52
SIMC1-208ENST00000495423 CBWD2Q8IUF1 395 aa24.54■■□□□ 1.52
SIMC1-208ENST00000495423 ETFBKMTQ8IXQ9 262 aa24.54■■□□□ 1.52
SIMC1-208ENST00000495423 CEP76Q8TAP6 659 aa24.54■■□□□ 1.52
SIMC1-208ENST00000495423 DUSP9Q99956 384 aaKnown RBP24.54■■□□□ 1.52
SIMC1-208ENST00000495423 MRPL45Q9BRJ2 306 aaKnown RBP24.54■■□□□ 1.52
SIMC1-208ENST00000495423 ELOVL4Q9GZR5 314 aa24.54■■□□□ 1.52
SIMC1-208ENST00000495423 ZDHHC4Q9NPG8 344 aa24.54■■□□□ 1.52
SIMC1-208ENST00000495423 KLK13Q9UKR3 277 aa24.54■■□□□ 1.52
SIMC1-208ENST00000495423 SLC6A14Q9UN76 642 aa24.54■■□□□ 1.52
SIMC1-208ENST00000495423 ADAMTS20P59510 1910 aa24.54■■□□□ 1.52
SIMC1-208ENST00000495423 ATXN2Q99700 1313 aaKnown RBP24.54■■□□□ 1.52
SIMC1-208ENST00000495423 SPAARA0A1B0GVQ0 90 aa24.53■■□□□ 1.52
SIMC1-208ENST00000495423 FAM221BA6H8Z2 402 aa24.53■■□□□ 1.52
SIMC1-208ENST00000495423 AP5Z1O43299 807 aa24.53■■□□□ 1.52
SIMC1-208ENST00000495423 MBD3O95983 291 aa24.53■■□□□ 1.52
SIMC1-208ENST00000495423 GNL1P36915 607 aaPredicted RBP24.53■■□□□ 1.52
SIMC1-208ENST00000495423 CACNA2D1P54289 1103 aa24.53■■□□□ 1.52
SIMC1-208ENST00000495423 SIM1P81133 766 aaPredicted RBP24.53■■□□□ 1.52
SIMC1-208ENST00000495423 GAD2Q05329 585 aa24.53■■□□□ 1.52
SIMC1-208ENST00000495423 DUOXA1Q1HG43 343 aa24.53■■□□□ 1.52
SIMC1-208ENST00000495423 HS2ST1Q7LGA3 356 aa24.53■■□□□ 1.52
SIMC1-208ENST00000495423 TRAPPC11Q7Z392 1133 aa24.53■■□□□ 1.52
SIMC1-208ENST00000495423 PGBD3Q8N328 593 aa24.53■■□□□ 1.52
SIMC1-208ENST00000495423 SPATA20Q8TB22 786 aa24.53■■□□□ 1.52
SIMC1-208ENST00000495423 OVCA2Q8WZ82 227 aa24.53■■□□□ 1.52
SIMC1-208ENST00000495423 ZFRQ96KR1 1074 aaKnown RBP24.53■■□□□ 1.52
SIMC1-208ENST00000495423 SNX25Q9H3E2 840 aa24.53■■□□□ 1.52
SIMC1-208ENST00000495423 CAPN10Q9HC96 672 aa24.53■■□□□ 1.52
SIMC1-208ENST00000495423 ACACAQ13085 2346 aa24.52■■□□□ 1.52
SIMC1-208ENST00000495423 LAMA5O15230 3695 aa24.52■■□□□ 1.52
SIMC1-208ENST00000495423 H0Y626 953 aa24.52■■□□□ 1.52
SIMC1-208ENST00000495423 SMC2O95347 1197 aa24.52■■□□□ 1.52
SIMC1-208ENST00000495423 TRIM16O95361 564 aa24.52■■□□□ 1.52
SIMC1-208ENST00000495423 CFIP05156 583 aa24.52■■□□□ 1.52
SIMC1-208ENST00000495423 SERPINF2P08697 491 aa24.52■■□□□ 1.52
SIMC1-208ENST00000495423 SLC36A4Q6YBV0 504 aa24.52■■□□□ 1.52
SIMC1-208ENST00000495423 TRMT11Q7Z4G4 463 aaKnown RBP24.52■■□□□ 1.52
SIMC1-208ENST00000495423 HDDC3Q8N4P3 179 aa24.52■■□□□ 1.52
SIMC1-208ENST00000495423 PDZD8Q8NEN9 1154 aa24.52■■□□□ 1.52
SIMC1-208ENST00000495423 GSDMAQ96QA5 445 aa24.52■■□□□ 1.52
SIMC1-208ENST00000495423 KIAA1586Q9HCI6 787 aa24.52■■□□□ 1.52
SIMC1-208ENST00000495423 RMND1Q9NWS8 449 aa24.52■■□□□ 1.52
SIMC1-208ENST00000495423 UBE4BO95155 1302 aa24.52■■□□□ 1.52
SIMC1-208ENST00000495423 PLXNB3Q9ULL4 1909 aa24.51■■□□□ 1.51
SIMC1-208ENST00000495423 EIF3DO15371 548 aaKnown RBP eCLIP24.51■■□□□ 1.51
SIMC1-208ENST00000495423 HOXC11O43248 304 aaPredicted RBP24.51■■□□□ 1.51
SIMC1-208ENST00000495423 KLRC4O43908 158 aa24.51■■□□□ 1.51
SIMC1-208ENST00000495423 RHOBTB3O94955 611 aa24.51■■□□□ 1.51
SIMC1-208ENST00000495423 PTPN1P18031 435 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms