RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 RAB23Q9ULC3 237 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 SCML2Q9UQR0 700 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 CACNA1AO00555 2505 aa10.31□□□□□ -0.76
UFD1-210ENST00000494054 CCDC163A0A0D9SF12 145 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 GREM1O60565 184 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 GADD45BO75293 160 aaPredicted RBP10.3□□□□□ -0.76
UFD1-210ENST00000494054 IRF1P10914 325 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 CHRM1P11229 460 aaPredicted RBP10.3□□□□□ -0.76
UFD1-210ENST00000494054 ACO1P21399 889 aaKnown RBP10.3□□□□□ -0.76
UFD1-210ENST00000494054 TUBP50607 506 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 KIF11P52732 1056 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 RAD23BP54727 409 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 SEC13P55735 322 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 FKBP3Q00688 224 aaKnown RBP10.3□□□□□ -0.76
UFD1-210ENST00000494054 DMC1Q14565 340 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 C2orf27AQ580R0 203 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 LY6G5CQ5SRR4 150 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 TCERG1LQ5VWI1 586 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 SCD5Q86SK9 330 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 DDX42Q86XP3 938 aaKnown RBP eCLIP10.3□□□□□ -0.76
UFD1-210ENST00000494054 CAMKK1Q8N5S9 505 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 GPR161Q8N6U8 529 aaKnown RBP10.3□□□□□ -0.76
UFD1-210ENST00000494054 SLC4A11Q8NBS3 891 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 CCDC150Q8NCX0 1101 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 GAB3Q8WWW8 586 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 HEXIM2Q96MH2 286 aaKnown RBP10.3□□□□□ -0.76
UFD1-210ENST00000494054 TSG101Q99816 390 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 KLF16Q9BXK1 252 aaPredicted RBP10.3□□□□□ -0.76
UFD1-210ENST00000494054 DUSP16Q9BY84 665 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 FBXO44Q9H4M3 255 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 CYLDQ9NQC7 956 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 TLR8Q9NR97 1041 aaKnown RBP10.3□□□□□ -0.76
UFD1-210ENST00000494054 CISHQ9NSE2 258 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 TBC1D14Q9P2M4 693 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 NUDT5Q9UKK9 219 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 MAN1B1Q9UKM7 699 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 USP18Q9UMW8 372 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 COQ4Q9Y3A0 265 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 SH3BP1Q9Y3L3 701 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 MYOFQ9NZM1 2061 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 MYO16Q9Y6X6 1858 aa10.3□□□□□ -0.76
UFD1-210ENST00000494054 SDK1Q7Z5N4 2213 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 KIAA1549LQ6ZVL6 1849 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 A0A0A0MRY4 1105 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 A0A1W2PQH9 124 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 DCLK1O15075 740 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 MDM4O15151 490 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 AXIN1O15169 862 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 SLC16A3O15427 465 aaKnown RBP10.29□□□□□ -0.76
UFD1-210ENST00000494054 STX10O60499 249 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 RPP40O75818 363 aaKnown RBP10.29□□□□□ -0.76
UFD1-210ENST00000494054 KAT7O95251 611 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 ADH1CP00326 375 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 ADH5P11766 374 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 RARGP13631 454 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 HNRNPLP14866 589 aaKnown RBP eCLIP10.29□□□□□ -0.76
UFD1-210ENST00000494054 BMP6P22004 513 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 PUM1Q14671 1186 aaKnown RBP eCLIP10.29□□□□□ -0.76
UFD1-210ENST00000494054 DCAF17Q5H9S7 520 aaPredicted RBP10.29□□□□□ -0.76
UFD1-210ENST00000494054 EMC10Q5UCC4 262 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 HTR3DQ70Z44 454 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 ERMP1Q7Z2K6 904 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.29□□□□□ -0.76
UFD1-210ENST00000494054 KBTBD6Q86V97 674 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 TMEM25Q86YD3 366 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 PHTF2Q8N3S3 785 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 CCDC33Q8N5R6 958 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 NAT16Q8N8M0 369 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 SLC35C1Q96A29 364 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 ACDQ96AP0 544 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 TMEM176AQ96HP8 235 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 FAXDC2Q96IV6 333 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 PNKPQ96T60 521 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 NACA2Q9H009 215 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 PNPLA8Q9NP80 782 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 ZDHHC4Q9NPG8 344 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 SEMA4GQ9NTN9 838 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.29□□□□□ -0.76
UFD1-210ENST00000494054 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.29□□□□□ -0.76
UFD1-210ENST00000494054 USP3Q9Y6I4 520 aa10.29□□□□□ -0.76
UFD1-210ENST00000494054 PPP1R3GB7ZBB8 358 aa10.28□□□□□ -0.76
UFD1-210ENST00000494054 TRIM24O15164 1050 aa10.28□□□□□ -0.76
UFD1-210ENST00000494054 APBB3O95704 486 aa10.28□□□□□ -0.76
UFD1-210ENST00000494054 CCDC192P0DO97 292 aa10.28□□□□□ -0.76
UFD1-210ENST00000494054 TRIM21P19474 475 aaKnown RBP10.28□□□□□ -0.76
UFD1-210ENST00000494054 ATP5C1P36542 298 aaKnown RBP10.28□□□□□ -0.76
UFD1-210ENST00000494054 EIF2DP41214 584 aaKnown RBP10.28□□□□□ -0.76
UFD1-210ENST00000494054 KIR2DL1P43626 348 aaPredicted RBP10.28□□□□□ -0.76
UFD1-210ENST00000494054 ATXN1P54253 815 aaKnown RBP10.28□□□□□ -0.76
UFD1-210ENST00000494054 MRPS21P82921 87 aaKnown RBP10.28□□□□□ -0.76
UFD1-210ENST00000494054 LMNB2Q03252 620 aa10.28□□□□□ -0.76
UFD1-210ENST00000494054 GAD2Q05329 585 aa10.28□□□□□ -0.76
UFD1-210ENST00000494054 LRRC63Q05C16 580 aa10.28□□□□□ -0.76
UFD1-210ENST00000494054 KDSRQ06136 332 aa10.28□□□□□ -0.76
UFD1-210ENST00000494054 LRMPQ12912 555 aa10.28□□□□□ -0.76
UFD1-210ENST00000494054 CUL2Q13617 745 aa10.28□□□□□ -0.76
UFD1-210ENST00000494054 CSRP2Q16527 193 aa10.28□□□□□ -0.76
UFD1-210ENST00000494054 ARHGAP17Q68EM7 881 aa10.28□□□□□ -0.76
UFD1-210ENST00000494054 TMEM92Q6UXU6 159 aa10.28□□□□□ -0.76
UFD1-210ENST00000494054 DGLUCYQ7Z3D6 616 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms