RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 FBXO32Q969P5 355 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 TRIM44Q96DX7 344 aaPredicted RBP13.06□□□□□ -0.32
SNX17-208ENST00000493711 GCNAQ96QF7 691 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 CDK5RAP1Q96SZ6 601 aaKnown RBP13.06□□□□□ -0.32
SNX17-208ENST00000493711 C11orf70Q9BRQ4 267 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 ASAH2Q9NR71 780 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 PARVAQ9NVD7 372 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 ZMYM5Q9UJ78 669 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 PCDHA13Q9Y5I0 950 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 CCDC195A0A1B0GUA6 201 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 CCP110O43303 1012 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 HSF2BPO75031 334 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 SOAT2O75908 522 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 ERBB2P04626 1255 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 DESP17661 470 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 CDC25CP30307 473 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 GPR15P49685 360 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 GALCP54803 685 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 DAOAP59103 153 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 SLC6A3Q01959 620 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 PTP4A2Q12974 167 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 CTC1Q2NKJ3 1217 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 CYP4A22Q5TCH4 519 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 OR6B2Q6IFH4 312 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 ANKRD54Q6NXT1 300 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 DNAJC24Q6P3W2 148 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 SLC26A9Q7LBE3 791 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 TADA2BQ86TJ2 420 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 XYLT1Q86Y38 959 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 RHOT2Q8IXI1 618 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 STKLD1Q8NE28 680 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 VN1R2Q8NFZ6 395 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 MYLIPQ8WY64 445 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 ZNF653Q96CK0 615 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 PABPC5Q96DU9 382 aaKnown RBP13.05□□□□□ -0.32
SNX17-208ENST00000493711 MCRS1Q96EZ8 462 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 ULBP1Q9BZM6 244 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 TSGA10Q9BZW7 698 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 PIDD1Q9HB75 910 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 TLR8Q9NR97 1041 aaKnown RBP13.05□□□□□ -0.32
SNX17-208ENST00000493711 RRN3Q9NYV6 651 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 TAS2R14Q9NYV8 317 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 CLIC5Q9NZA1 410 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 TRPM5Q9NZQ8 1165 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 RAPGEFL1Q9UHV5 662 aa13.05□□□□□ -0.32
SNX17-208ENST00000493711 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 CCL16O15467 120 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 PAPSS1O43252 624 aaPredicted RBP13.04□□□□□ -0.32
SNX17-208ENST00000493711 ZSCAN12O43309 604 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 CYP1A2P05177 515 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 RALAP11233 206 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 FOSL2P15408 326 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 HMGA1P17096 107 aaKnown RBP13.04□□□□□ -0.32
SNX17-208ENST00000493711 PFKLP17858 780 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 PLA2G5P39877 138 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 CDR1P51861 262 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 VAV2P52735 878 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 EPHA5P54756 1037 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 YWHAZP63104 245 aaKnown RBP13.04□□□□□ -0.32
SNX17-208ENST00000493711 KIF5AQ12840 1032 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 MTF1Q14872 753 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 TCEAL1Q15170 157 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 TJAP1Q5JTD0 557 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 SDHAF4Q5VUM1 108 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 SNX30Q5VWJ9 437 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 PLEKHA7Q6IQ23 1121 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 CES5AQ6NT32 575 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 OLFML1Q6UWY5 402 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 GPRIN1Q7Z2K8 1008 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 KIAA1328Q86T90 577 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 SCUBE3Q8IX30 993 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 ZNF276Q8N554 614 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 SCAMP5Q8TAC9 235 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 SMG7Q92540 1137 aaKnown RBP13.04□□□□□ -0.32
SNX17-208ENST00000493711 SELENOOQ9BVL4 669 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 ABCC13Q9NSE7 274 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 OLA1Q9NTK5 396 aaKnown RBP13.04□□□□□ -0.32
SNX17-208ENST00000493711 UVRAGQ9P2Y5 699 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 CNOT8Q9UFF9 292 aaKnown RBP13.04□□□□□ -0.32
SNX17-208ENST00000493711 MAGED2Q9UNF1 606 aaPredicted RBP13.04□□□□□ -0.32
SNX17-208ENST00000493711 ADGRG1Q9Y653 693 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 PLXNA4Q9HCM2 1894 aa13.04□□□□□ -0.32
SNX17-208ENST00000493711 VWA8A3KMH1 1905 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 A0A0A6YYK5 440 aaPredicted RBP13.03□□□□□ -0.32
SNX17-208ENST00000493711 SIGLEC16A6NMB1 481 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 BTNL10A8MVZ5 291 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 ZNF263O14978 683 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 RFPL2O75678 378 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 LTFP02788 710 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 USP17L7P0C7H9 530 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 KRT3P12035 628 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 ABCB4P21439 1286 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 DDX6P26196 483 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNX17-208ENST00000493711 TUBP50607 506 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 YWHAGP61981 247 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNX17-208ENST00000493711 TAF10Q12962 218 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 IFI16Q16666 785 aaKnown RBP13.03□□□□□ -0.32
SNX17-208ENST00000493711 ARHGAP15Q53QZ3 475 aa13.03□□□□□ -0.32
SNX17-208ENST00000493711 FAM102AQ5T9C2 384 aaPredicted RBP13.03□□□□□ -0.32
SNX17-208ENST00000493711 BTBD8Q5XKL5 378 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms