RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 ACDQ96AP0 544 aa15.49■□□□□ 0.07
ATG4B-223ENST00000493618 CYFIP2Q96F07 1278 aa15.49■□□□□ 0.07
ATG4B-223ENST00000493618 NIF3L1Q9GZT8 377 aa15.49■□□□□ 0.07
ATG4B-223ENST00000493618 CSNK1G1Q9HCP0 422 aa15.49■□□□□ 0.07
ATG4B-223ENST00000493618 ZDHHC4Q9NPG8 344 aa15.49■□□□□ 0.07
ATG4B-223ENST00000493618 COMMD8Q9NX08 183 aa15.49■□□□□ 0.07
ATG4B-223ENST00000493618 CEP250Q9BV73 2442 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 CCDC163A0A0D9SF12 145 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 E2F8A0AVK6 867 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 GDF9O60383 454 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 APBB3O95704 486 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 TBX18O95935 607 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 ADH1CP00326 375 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 TIE1P35590 1138 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 DGKEP52429 567 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 INCA1Q0VD86 236 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 SF3A2Q15428 464 aaKnown RBP15.48■□□□□ 0.07
ATG4B-223ENST00000493618 CSRP2Q16527 193 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 EMC10Q5UCC4 262 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 FMR1NBQ8N0W7 255 aaPredicted RBP15.48■□□□□ 0.07
ATG4B-223ENST00000493618 CCDC150Q8NCX0 1101 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 PNKPQ96T60 521 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 HNRNPABQ99729 332 aaKnown RBP15.48■□□□□ 0.07
ATG4B-223ENST00000493618 NT5C1AQ9BXI3 368 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 TPSD1Q9BZJ3 242 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 SMOC1Q9H4F8 434 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 CYP3A43Q9HB55 503 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 TMEM8AQ9HCN3 771 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 OSER1Q9NX31 292 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 NUDT5Q9UKK9 219 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 SDK1Q7Z5N4 2213 aa15.48■□□□□ 0.07
ATG4B-223ENST00000493618 MYO18AQ92614 2054 aaKnown RBP15.47■□□□□ 0.07
ATG4B-223ENST00000493618 FAM92AA1XBS5 289 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 HHLA1C9JL84 531 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 MDM4O15151 490 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 TLR5O60602 858 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 LRP3O75074 770 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 CILPO75339 1184 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 KAT7O95251 611 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 APODP05090 189 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 ACO1P21399 889 aaKnown RBP15.47■□□□□ 0.07
ATG4B-223ENST00000493618 PRCPP42785 496 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 TUBP50607 506 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 KRT39Q6A163 491 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 ALLCQ8N6M5 410 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 TSTD1Q8NFU3 115 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 FBXO44Q9H4M3 255 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 NMUR1Q9HB89 426 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 ARHGEF4Q9NR80 690 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 TLR8Q9NR97 1041 aaKnown RBP15.47■□□□□ 0.07
ATG4B-223ENST00000493618 TBC1D14Q9P2M4 693 aa15.47■□□□□ 0.07
ATG4B-223ENST00000493618 TNRC6BQ9UPQ9 1833 aaKnown RBP15.47■□□□□ 0.07
ATG4B-223ENST00000493618 A0A1W2PQH9 124 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 GOLGA6L4A6NEF3 574 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 CETN3O15182 167 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 EPN2O95208 641 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 KLF8O95600 359 aaPredicted RBP15.46■□□□□ 0.07
ATG4B-223ENST00000493618 EPB41P11171 864 aaKnown RBP15.46■□□□□ 0.07
ATG4B-223ENST00000493618 HNRNPLP14866 589 aaKnown RBP eCLIP15.46■□□□□ 0.07
ATG4B-223ENST00000493618 TRIM21P19474 475 aaKnown RBP15.46■□□□□ 0.07
ATG4B-223ENST00000493618 SDHBP21912 280 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 MXI1P50539 228 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 ANO4Q32M45 955 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 EDRF1Q3B7T1 1238 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 PLK5Q496M5 336 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 DCAF17Q5H9S7 520 aaPredicted RBP15.46■□□□□ 0.07
ATG4B-223ENST00000493618 PPP1R26Q5T8A7 1209 aaPredicted RBP15.46■□□□□ 0.07
ATG4B-223ENST00000493618 ANO7Q6IWH7 933 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 TMEM25Q86YD3 366 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 KIAA1958Q8N8K9 716 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 TXNDC5Q8NBS9 432 aaKnown RBP15.46■□□□□ 0.07
ATG4B-223ENST00000493618 TATDN2Q93075 761 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 ARID3AQ99856 593 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 RTKNQ9BST9 563 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 DUSP15Q9H1R2 295 aaPredicted RBP15.46■□□□□ 0.07
ATG4B-223ENST00000493618 MMP17Q9ULZ9 603 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 SCML2Q9UQR0 700 aa15.46■□□□□ 0.07
ATG4B-223ENST00000493618 ABCA7Q8IZY2 2146 aa15.46■□□□□ 0.06
ATG4B-223ENST00000493618 CACNA1AO00555 2505 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 TRIM49BA6NDI0 452 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 TRIM24O15164 1050 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 GTF2H1P32780 548 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 PMS1P54277 932 aaKnown RBP15.45■□□□□ 0.06
ATG4B-223ENST00000493618 GAD2Q05329 585 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 ENPEPQ07075 957 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 BECN1Q14457 450 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 AASDHQ4L235 1098 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-223ENST00000493618 ZNF658Q5TYW1 1059 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-223ENST00000493618 TCERG1LQ5VWI1 586 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 ANKRD40Q6AI12 368 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 ISM2Q6H9L7 571 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 TMEM92Q6UXU6 159 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 PHTF2Q8N3S3 785 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 NETO1Q8TDF5 533 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 CCDC34Q96HJ3 373 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 HEXIM2Q96MH2 286 aaKnown RBP15.45■□□□□ 0.06
ATG4B-223ENST00000493618 KLF16Q9BXK1 252 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-223ENST00000493618 SPHK2Q9NRA0 654 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 RXFP3Q9NSD7 469 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 RMND1Q9NWS8 449 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms