RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 EPCAMP16422 314 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 ROR1Q01973 937 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 INCA1Q0VD86 236 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 LBRQ14739 615 aaKnown RBP7.19□□□□□ -1.26
VPS52-219ENST00000493379 NCAPHQ15003 741 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 WDR72Q3MJ13 1102 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 CTXN3Q4LDR2 81 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 CDKAL1Q5VV42 579 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 LMBRD2Q68DH5 695 aaPredicted RBP7.19□□□□□ -1.26
VPS52-219ENST00000493379 ZNF280DQ6N043 979 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 DPY19L2P1Q6NXN4 242 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 DSTYKQ6XUX3 929 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 GPR149Q86SP6 731 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 RBM23Q86U06 439 aaKnown RBP7.19□□□□□ -1.26
VPS52-219ENST00000493379 LRRTM3Q86VH5 581 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 CEP57Q86XR8 500 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 CRYBG2Q8N1P7 616 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 GPR161Q8N6U8 529 aaKnown RBP7.19□□□□□ -1.26
VPS52-219ENST00000493379 FBXL13Q8NEE6 735 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 C2orf15Q8WU43 125 aaKnown RBP7.19□□□□□ -1.26
VPS52-219ENST00000493379 ZCCHC14Q8WYQ9 949 aaKnown RBP7.19□□□□□ -1.26
VPS52-219ENST00000493379 SEMA4DQ92854 862 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 RNF34Q969K3 372 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 ZNF707Q96C28 371 aaPredicted RBP7.19□□□□□ -1.26
VPS52-219ENST00000493379 EEF2KMTQ96G04 330 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 FAM84AQ96KN4 292 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 CEP295NLQ96MC4 621 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 APOL5Q9BWW9 433 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 HSD3B7Q9H2F3 369 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 CYP3A43Q9HB55 503 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 APOBEC3GQ9HC16 384 aaKnown RBP7.19□□□□□ -1.26
VPS52-219ENST00000493379 ANO10Q9NW15 660 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 RAB20Q9NX57 234 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 CACNA2D2Q9NY47 1150 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 ABI2Q9NYB9 513 aaPredicted RBP7.19□□□□□ -1.26
VPS52-219ENST00000493379 SRPK3Q9UPE1 567 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 CDY1Q9Y6F8 540 aa7.19□□□□□ -1.26
VPS52-219ENST00000493379 FREM2Q5SZK8 3169 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 EIF4E1BA6NMX2 242 aaKnown RBP7.18□□□□□ -1.26
VPS52-219ENST00000493379 C2CD2LO14523 706 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 EFSO43281 561 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 MAN1A2O60476 641 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 HUS1O60921 280 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 N4BP1O75113 896 aaKnown RBP7.18□□□□□ -1.26
VPS52-219ENST00000493379 CAVIN2O95810 425 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 HLA-DRAP01903 254 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 THBS1P07996 1170 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 FAM157BP0CG42 384 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 TRIM49P0CI25 452 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 TRIM49CP0CI26 452 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 SRGAP2BP0DMP2 458 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 CCDC192P0DO97 292 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 ZNF18P17022 549 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 RPL17P18621 184 aaKnown RBP7.18□□□□□ -1.26
VPS52-219ENST00000493379 PCSK1P29120 753 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 GCLMP48507 274 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 FMO5P49326 533 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 STX17P56962 302 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 SPEM2Q0P670 501 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 TRPC3Q13507 836 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 CFAP221Q4G0U5 840 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 CBWD6Q4V339 395 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 CBWD3Q5JTY5 395 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 CBWD5Q5RIA9 395 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 KLHL10Q6JEL2 608 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 FIGNL1Q6PIW4 674 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 CCDC149Q6ZUS6 474 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 UNC93AQ86WB7 457 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 OSTM1Q86WC4 334 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 METTL23Q86XA0 190 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 THEM5Q8N1Q8 247 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 UBR7Q8N806 425 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 OR10T2Q8NGX3 314 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 NETO1Q8TDF5 533 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 TAS1R2Q8TE23 839 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 JAKMIP2Q96AA8 810 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 FUBP3Q96I24 572 aaKnown RBP eCLIP7.18□□□□□ -1.26
VPS52-219ENST00000493379 NECTIN4Q96NY8 510 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 C12orf49Q9H741 205 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 SFXN1Q9H9B4 322 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 ABCB6Q9NP58 842 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 NPHS2Q9NP85 383 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 ATP13A2Q9NQ11 1180 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 CDH9Q9ULB4 789 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 CNTN6Q9UQ52 1028 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 CTNND2Q9UQB3 1225 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 NME7Q9Y5B8 376 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 TIMM13Q9Y5L4 95 aaPredicted RBP7.18□□□□□ -1.26
VPS52-219ENST00000493379 SNX9Q9Y5X1 595 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 VWA8A3KMH1 1905 aa7.18□□□□□ -1.26
VPS52-219ENST00000493379 MTMR11A4FU01 709 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 C2CD4DB7Z1M9 353 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 EREGO14944 169 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 ATXN7O15265 892 aaPredicted RBP7.17□□□□□ -1.26
VPS52-219ENST00000493379 ARHGAP6O43182 974 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 LRRN2O75325 713 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 SEC24AO95486 1093 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 KRT19P08727 400 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 PLA2G2AP14555 144 aa7.17□□□□□ -1.26
VPS52-219ENST00000493379 LMO2P25791 158 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms