RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 CCNG2Q16589 344 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 FBXO47Q5MNV8 452 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 MAGEB18Q96M61 343 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 POLR1AO95602 1720 aaPredicted RBP16.83■□□□□ 0.28
BRAT1-206ENST00000493232 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
BRAT1-206ENST00000493232 PLOD1Q02809 727 aaPredicted RBP16.83■□□□□ 0.28
BRAT1-206ENST00000493232 TRIM60Q495X7 471 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 EFCAB1Q9HAE3 211 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 FGFR2P21802 821 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 C1QBPQ07021 282 aaKnown RBP16.82■□□□□ 0.28
BRAT1-206ENST00000493232 SEC23AQ15436 765 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 ANKRD7Q92527 254 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 VPS50Q96JG6 964 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 TMEM245Q9H330 911 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 SEMA6BQ9H3T3 888 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 TBC1D23Q9NUY8 699 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.82■□□□□ 0.28
BRAT1-206ENST00000493232 PHTF1Q9UMS5 762 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 CD44P16070 742 aaKnown RBP16.82■□□□□ 0.28
BRAT1-206ENST00000493232 ATXN3P54252 364 aaPredicted RBP16.82■□□□□ 0.28
BRAT1-206ENST00000493232 TAS1R2Q8TE23 839 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 ATG4AQ8WYN0 398 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 CCT7Q99832 543 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 TSEN34Q9BSV6 310 aaKnown RBP16.82■□□□□ 0.28
BRAT1-206ENST00000493232 IARS2Q9NSE4 1012 aaKnown RBP16.82■□□□□ 0.28
BRAT1-206ENST00000493232 IMPAD1Q9NX62 359 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 SALL1Q9NSC2 1324 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 IL1R1P14778 569 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 GRK3P35626 688 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 MRPS15P82914 257 aaKnown RBP16.82■□□□□ 0.28
BRAT1-206ENST00000493232 LAMTOR4Q0VGL1 99 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 KCNT1Q5JUK3 1230 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 SLC26A11Q86WA9 606 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.82■□□□□ 0.28
BRAT1-206ENST00000493232 DDI1Q8WTU0 396 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 CPB2Q96IY4 423 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 YME1L1Q96TA2 773 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 CACNA2D2Q9NY47 1150 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 SLC24A2Q9UI40 661 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 LNPEPQ9UIQ6 1025 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 A0A1B0GW55 424 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 PRR23D1E9PI22 279 aaPredicted RBP16.82■□□□□ 0.28
BRAT1-206ENST00000493232 DYRK3O43781 588 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 DUX4L2P0CJ85 424 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 DUX4L3P0CJ86 424 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 DUX4L4P0CJ87 422 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 DUX4L5P0CJ88 424 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 DUX4L6P0CJ89 424 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 DUX4L7P0CJ90 424 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 PRR23D2P0DMB1 279 aaPredicted RBP16.82■□□□□ 0.28
BRAT1-206ENST00000493232 RRM1P23921 792 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 MAP3K7CLP57077 242 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 MYL6P60660 151 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 EZH2Q15910 746 aaKnown RBP16.82■□□□□ 0.28
BRAT1-206ENST00000493232 REXO1L1PQ8IX06 675 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 BHMTQ93088 406 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 FICDQ9BVA6 458 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 TMEM51Q9NW97 253 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 DUX4Q9UBX2 424 aa16.82■□□□□ 0.28
BRAT1-206ENST00000493232 ZMYM2Q9UBW7 1377 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 IGF2BP3O00425 579 aaKnown RBP eCLIP16.81■□□□□ 0.28
BRAT1-206ENST00000493232 CYTH3O43739 400 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 TCF3P15923 654 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 AVPR1AP37288 418 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 RENBPP51606 427 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 AMPD2Q01433 879 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 BTKQ06187 659 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 DDX39BQ13838 428 aaKnown RBP16.81■□□□□ 0.28
BRAT1-206ENST00000493232 C9orf131Q5VYM1 1079 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 C11orf63Q6NUN7 778 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 WDR93Q6P2C0 686 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 ZDHHC17Q8IUH5 632 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 DTNBP1Q96EV8 351 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 STARD7Q9NQZ5 370 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 TLR8Q9NR97 1041 aaKnown RBP16.81■□□□□ 0.28
BRAT1-206ENST00000493232 A0A087WZ62 844 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 MAGEB16A2A368 324 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 SKAP2O75563 359 aaPredicted RBP16.81■□□□□ 0.28
BRAT1-206ENST00000493232 GRK2P25098 689 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 OAZ1P54368 228 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 SLC20A1Q8WUM9 679 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 CAMKK2Q96RR4 588 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 TBCBQ99426 244 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 FDXACB1Q9BRP7 624 aaPredicted RBP16.81■□□□□ 0.28
BRAT1-206ENST00000493232 SPATC1LQ9H0A9 340 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 KIAA1683Q9H0B3 1180 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 WDR41Q9HAD4 459 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 USP1O94782 785 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 GLP2RO95838 553 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 ITIH4Q14624 930 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 NIPA1Q7RTP0 329 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 RXFP2Q8WXD0 754 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 IL25Q9H293 177 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 ACOT9Q9Y305 439 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 H3BRB1 525 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 SOX11P35716 441 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 TUT1Q9H6E5 874 aaKnown RBP16.81■□□□□ 0.28
BRAT1-206ENST00000493232 GPATCH2LQ9NWQ4 482 aa16.81■□□□□ 0.28
BRAT1-206ENST00000493232 MAP3K13O43283 966 aa16.8■□□□□ 0.28
BRAT1-206ENST00000493232 TOMM70O94826 608 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms