RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 DEKP35659 375 aaKnown RBP14.13□□□□□ -0.15
MSH6-208ENST00000493177 GPD2P43304 727 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 RGS7P49802 495 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 CACNA2D1P54289 1103 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 PTPN5P54829 565 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 NOMO3P69849 1222 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 PFKPQ01813 784 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 TEAD2Q15562 447 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 ASTE1Q2TB18 679 aaPredicted RBP14.13□□□□□ -0.15
MSH6-208ENST00000493177 CFAP221Q4G0U5 840 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 PRSS36Q5K4E3 855 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 ACAD10Q6JQN1 1059 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 ALKBH5Q6P6C2 394 aaKnown RBP14.13□□□□□ -0.15
MSH6-208ENST00000493177 CLEC20AQ6ZU45 233 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 MSANTD4Q8NCY6 345 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 SLC30A5Q8TAD4 765 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 SMOQ99835 787 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 RPP25Q9BUL9 199 aaKnown RBP14.13□□□□□ -0.15
MSH6-208ENST00000493177 CRISPLD1Q9H336 500 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 ATXN3LQ9H3M9 355 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 ZFP14Q9HCL3 533 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 ABCB6Q9NP58 842 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 ARHGEF3Q9NR81 526 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 TAS2R14Q9NYV8 317 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 HSFX1Q9UBD0 423 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 NAGPAQ9UK23 515 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 EIF3CLB5ME19 914 aaKnown RBP14.12□□□□□ -0.15
MSH6-208ENST00000493177 F8VP50 259 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 TULP2O00295 520 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 PIK3R2O00459 728 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 DPYSL4O14531 572 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 XPO1O14980 1071 aaKnown RBP14.12□□□□□ -0.15
MSH6-208ENST00000493177 RTN2O75298 545 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 ECI2O75521 394 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 BEST1O76090 585 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 VNN2O95498 520 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 HAPLN1P10915 354 aaPredicted RBP14.12□□□□□ -0.15
MSH6-208ENST00000493177 UNGP13051 313 aaPredicted RBP14.12□□□□□ -0.15
MSH6-208ENST00000493177 GABRR2P28476 465 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 CCR2P41597 374 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 MAGEA11P43364 429 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 GPR15P49685 360 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 RPL10AP62906 217 aaKnown RBP14.12□□□□□ -0.15
MSH6-208ENST00000493177 GPC5P78333 572 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 PDCLQ13371 301 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 PKDCCQ504Y2 493 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 IER5LQ5T953 404 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 SDHAF4Q5VUM1 108 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 PPP1R2P3Q6NXS1 205 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 VSTM1Q6UX27 236 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 DNAJB7Q7Z6W7 309 aaPredicted RBP14.12□□□□□ -0.15
MSH6-208ENST00000493177 PIGZQ86VD9 579 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 ERICH1Q86X53 443 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 DNAAF5Q86Y56 855 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 YAF2Q8IY57 180 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 WDTC1Q8N5D0 677 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 ACRBPQ8NEB7 543 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 OLIG1Q8TAK6 271 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 IPO4Q8TEX9 1081 aaKnown RBP14.12□□□□□ -0.15
MSH6-208ENST00000493177 GIPC2Q8TF65 315 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 PSMG2Q969U7 264 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 SHDQ96IW2 340 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 PPP1R13BQ96KQ4 1090 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 KCNK16Q96T55 309 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 EIF3CQ99613 913 aaKnown RBP14.12□□□□□ -0.15
MSH6-208ENST00000493177 C11orf70Q9BRQ4 267 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 DESI2Q9BSY9 194 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 LRRC4Q9HBW1 653 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 LUC7LQ9NQ29 371 aaKnown RBP14.12□□□□□ -0.15
MSH6-208ENST00000493177 SLC2A4RGQ9NR83 387 aa14.12□□□□□ -0.15
MSH6-208ENST00000493177 MAGED2Q9UNF1 606 aaPredicted RBP14.12□□□□□ -0.15
MSH6-208ENST00000493177 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.12□□□□□ -0.15
MSH6-208ENST00000493177 TICRRQ7Z2Z1 1910 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 FTLP02792 175 aaPredicted RBP14.11□□□□□ -0.15
MSH6-208ENST00000493177 GZMAP12544 262 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 LCP1P13796 627 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 AOC1P19801 751 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 CDC25CP30307 473 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 CDH5P33151 784 aaPredicted RBP14.11□□□□□ -0.15
MSH6-208ENST00000493177 MAGEA1P43355 309 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 PLA2G4AP47712 749 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 CLCN5P51795 746 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 SNX16P57768 344 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 KRT83P78385 493 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 CENPCQ03188 943 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 IFRD2Q12894 506 aaPredicted RBP14.11□□□□□ -0.15
MSH6-208ENST00000493177 GRM2Q14416 872 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 DDR2Q16832 855 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 FAM78AQ5JUQ0 283 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 CWF19L1Q69YN2 538 aaKnown RBP14.11□□□□□ -0.15
MSH6-208ENST00000493177 TANGO2Q6ICL3 276 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 PMF1Q6P1K2 205 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 TOGARAM2Q6ZUX3 1019 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 KIAA1328Q86T90 577 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 TMEM105Q8N8V8 129 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 ZMIZ2Q8NF64 920 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 PRSS33Q8NF86 280 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 ZSCAN18Q8TBC5 510 aaPredicted RBP14.11□□□□□ -0.15
MSH6-208ENST00000493177 SLC35F5Q8WV83 523 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 ELSPBP1Q96BH3 223 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms