RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 FNBP1LQ5T0N5 605 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 C6orf52Q5T4I8 152 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 LIN9Q5TKA1 542 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 PAOXQ6QHF9 649 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 ISLR2Q6UXK2 745 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 TPTE2Q6XPS3 522 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 ARCQ7LC44 396 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 PTF1AQ7RTS3 328 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 MAPKAPK5Q8IW41 473 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 PDIK1LQ8N165 341 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 CABLES1Q8TDN4 633 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 PPP4R1Q8TF05 950 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 NLRP7Q8WX94 980 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 USP6NLQ92738 828 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 RANBP9Q96S59 729 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 EIF2AK1Q9BQI3 630 aaKnown RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 EBF4Q9BQW3 602 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 GPATCH1Q9BRR8 931 aaKnown RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 TRIM56Q9BRZ2 755 aaKnown RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 CYP4F11Q9HBI6 524 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 SLC38A7Q9NVC3 462 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 THAP1Q9NVV9 213 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 KCND2Q9NZV8 630 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 CDH7Q9ULB5 785 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 ARHGAP26Q9UNA1 814 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 MYOCOSA0A1B0GUC4 107 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 H0YJX3 145 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 SGK1O00141 431 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 KRT37O76014 449 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 SORBS2O94875 1100 aaKnown RBP6.67□□□□□ -1.34
CCDC6-202ENST00000491922 BMP10O95393 424 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 CAPNS1P04632 268 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 LDHBP07195 334 aaKnown RBP6.67□□□□□ -1.34
CCDC6-202ENST00000491922 LDHCP07864 332 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 PTPN7P35236 360 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 ECE1P42892 770 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 NEK2P51955 445 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 STAT2P52630 851 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 C21orf59P57076 290 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 RHBDL3P58872 404 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 KCNC4Q03721 635 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 ZBTB17Q13105 803 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 GK3PQ14409 553 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 MSS51Q4VC12 460 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 C1orf220Q5T0J3 134 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 DEPDC1Q5TB30 811 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 LGSNQ5TDP6 509 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 KRT39Q6A163 491 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 NEPROQ6NW34 567 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 DENND5BQ6ZUT9 1274 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 ZNF677Q86XU0 584 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 CHERPQ8IWX8 916 aaKnown RBP6.67□□□□□ -1.34
CCDC6-202ENST00000491922 C12orf56Q8IXR9 622 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 NAT8LQ8N9F0 302 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 CHPT1Q8WUD6 406 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 AKT1S1Q96B36 256 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 PLEKHA8Q96JA3 519 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 DHRS1Q96LJ7 313 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 SLITRK1Q96PX8 696 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 SERPINI1Q99574 410 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 HEPHQ9BQS7 1158 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 MECRQ9BV79 373 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 DHX33Q9H6R0 707 aaKnown RBP6.67□□□□□ -1.34
CCDC6-202ENST00000491922 LIN28AQ9H9Z2 209 aaKnown RBP6.67□□□□□ -1.34
CCDC6-202ENST00000491922 MRPL47Q9HD33 250 aaKnown RBP6.67□□□□□ -1.34
CCDC6-202ENST00000491922 TUFT1Q9NNX1 390 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 STK39Q9UEW8 545 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 RIMS3Q9UJD0 308 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 GNPTGQ9UJJ9 305 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 VAV3Q9UKW4 847 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 PRPF19Q9UMS4 504 aaKnown RBP6.67□□□□□ -1.34
CCDC6-202ENST00000491922 DOLKQ9UPQ8 538 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 BCS1LQ9Y276 419 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 LOXHD1Q8IVV2 1947 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 CCDC195A0A1B0GUA6 201 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 USP17L15C9J2P7 530 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 USP17L13C9JLJ4 530 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 USP17L11C9JVI0 530 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 USP17L18D6R9N7 530 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 USP17L22D6RA61 530 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 USP17L17D6RBQ6 530 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 USP17L19D6RCP7 530 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 USP17L20D6RJB6 530 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 CNOT3O75175 753 aaKnown RBP6.67□□□□□ -1.34
CCDC6-202ENST00000491922 SIN3BO75182 1162 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 PIAS1O75925 651 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 H6PDO95479 791 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 IFNB1P01574 187 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 SNRPAP09012 282 aaKnown RBP6.67□□□□□ -1.34
CCDC6-202ENST00000491922 ATF7P17544 494 aaPredicted RBP6.67□□□□□ -1.34
CCDC6-202ENST00000491922 GJC1P36383 396 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 NSFP46459 744 aaKnown RBP6.67□□□□□ -1.34
CCDC6-202ENST00000491922 SLC5A3P53794 718 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 ESRRGP62508 458 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 TXNL4AP83876 142 aaKnown RBP6.67□□□□□ -1.34
CCDC6-202ENST00000491922 USP17L24Q0WX57 530 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 ALCAMQ13740 583 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 PSMD6Q15008 389 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 BBS9Q3SYG4 887 aa6.67□□□□□ -1.34
CCDC6-202ENST00000491922 ODR4Q5SWX8 454 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms