RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 LACTBL1A8MY62 500 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 TMEM233B4DJY2 109 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 BTN3A1O00481 513 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 SPRY2O43597 315 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 SRGAP2O75044 1071 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 EPHA3P29320 983 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 AMPD3Q01432 767 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 SLC14A1Q13336 389 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 STIM1Q13586 685 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 ZNF585BQ52M93 769 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 ZNF793Q6ZN11 406 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 Q6ZTC4 211 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 OR6B3Q8NGW1 331 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 CTHRC1Q96CG8 243 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 VN1R3Q9BXE9 311 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 TRIM54Q9BYV2 358 aa4.91□□□□□ -1.62
PHC3-213ENST00000491258 CLIC1O00299 241 aa4.9□□□□□ -1.63
PHC3-213ENST00000491258 TMPRSS11DO60235 418 aa4.9□□□□□ -1.63
PHC3-213ENST00000491258 NPR1P16066 1061 aa4.9□□□□□ -1.63
PHC3-213ENST00000491258 ATF7P17544 494 aaPredicted RBP4.9□□□□□ -1.63
PHC3-213ENST00000491258 TACR3P29371 465 aa4.9□□□□□ -1.63
PHC3-213ENST00000491258 HSF1Q00613 529 aa4.9□□□□□ -1.63
PHC3-213ENST00000491258 MFSD13AQ14CX5 517 aa4.9□□□□□ -1.63
PHC3-213ENST00000491258 CACHD1Q5VU97 1274 aa4.9□□□□□ -1.63
PHC3-213ENST00000491258 ZBTB46Q86UZ6 589 aa4.9□□□□□ -1.63
PHC3-213ENST00000491258 ZBTB8BQ8NAP8 495 aaPredicted RBP4.9□□□□□ -1.63
PHC3-213ENST00000491258 KBTBD7Q8WVZ9 684 aa4.9□□□□□ -1.63
PHC3-213ENST00000491258 NLRP4Q96MN2 994 aa4.9□□□□□ -1.63
PHC3-213ENST00000491258 ZPBPQ9BS86 351 aa4.9□□□□□ -1.63
PHC3-213ENST00000491258 CC2D2AQ9P2K1 1620 aa4.9□□□□□ -1.63
PHC3-213ENST00000491258 IGLV5-39A0A0G2JS06 123 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.89□□□□□ -1.63
PHC3-213ENST00000491258 RGS10O43665 173 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 TBC1D4O60343 1298 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 RASAL1O95294 804 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 VCAM1P19320 739 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 UQCRC1P31930 480 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 TIRAPP58753 221 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 CFHR3Q02985 330 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 HYAL1Q12794 435 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 SLC13A2Q13183 592 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 C18orf65Q6ZTR6 163 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 ADHFE1Q8IWW8 467 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 IGFBPL1Q8WX77 278 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 C1GALT1C1Q96EU7 318 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 ZBTB45Q96K62 511 aaPredicted RBP4.89□□□□□ -1.63
PHC3-213ENST00000491258 SCNM1Q9BWG6 230 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 SLCO5A1Q9H2Y9 848 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 ICKQ9UPZ9 632 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 CDY1Q9Y6F8 540 aa4.89□□□□□ -1.63
PHC3-213ENST00000491258 A0A088AWK7 358 aa4.88□□□□□ -1.63
PHC3-213ENST00000491258 A0A1W2PPL8 197 aa4.88□□□□□ -1.63
PHC3-213ENST00000491258 OFD1O75665 1012 aa4.88□□□□□ -1.63
PHC3-213ENST00000491258 KITP10721 976 aa4.88□□□□□ -1.63
PHC3-213ENST00000491258 TNFRSF1BP20333 461 aa4.88□□□□□ -1.63
PHC3-213ENST00000491258 RAB32Q13637 225 aa4.88□□□□□ -1.63
PHC3-213ENST00000491258 PFKFB3Q16875 520 aaPredicted RBP4.88□□□□□ -1.63
PHC3-213ENST00000491258 KRTAP27-1Q3LI81 207 aa4.88□□□□□ -1.63
PHC3-213ENST00000491258 ATAT1Q5SQI0 421 aa4.88□□□□□ -1.63
PHC3-213ENST00000491258 MANEAQ5SRI9 462 aa4.88□□□□□ -1.63
PHC3-213ENST00000491258 DCAF12L1Q5VU92 463 aa4.88□□□□□ -1.63
PHC3-213ENST00000491258 SLC25A28Q96A46 364 aa4.88□□□□□ -1.63
PHC3-213ENST00000491258 WDYHV1Q96HA8 205 aa4.88□□□□□ -1.63
PHC3-213ENST00000491258 NT5C1BQ96P26 610 aa4.88□□□□□ -1.63
PHC3-213ENST00000491258 MRPL44Q9H9J2 332 aaKnown RBP4.88□□□□□ -1.63
PHC3-213ENST00000491258 SEMA4BQ9NPR2 832 aaPredicted RBP4.88□□□□□ -1.63
PHC3-213ENST00000491258 GAR1Q9NY12 217 aaKnown RBP4.88□□□□□ -1.63
PHC3-213ENST00000491258 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.88□□□□□ -1.63
PHC3-213ENST00000491258 NCAPD3P42695 1498 aa4.88□□□□□ -1.63
PHC3-213ENST00000491258 C4orf47A7E2U8 309 aa4.87□□□□□ -1.63
PHC3-213ENST00000491258 INPPL1O15357 1258 aa4.87□□□□□ -1.63
PHC3-213ENST00000491258 SYF2O95926 243 aaKnown RBP4.87□□□□□ -1.63
PHC3-213ENST00000491258 CDC25AP30304 524 aa4.87□□□□□ -1.63
PHC3-213ENST00000491258 ARFIP2P53365 341 aa4.87□□□□□ -1.63
PHC3-213ENST00000491258 ZNF267Q14586 743 aaPredicted RBP4.87□□□□□ -1.63
PHC3-213ENST00000491258 IFIT1BQ5T764 474 aaKnown RBP4.87□□□□□ -1.63
PHC3-213ENST00000491258 ZDHHC24Q6UX98 284 aa4.87□□□□□ -1.63
PHC3-213ENST00000491258 USP43Q70EL4 1123 aa4.87□□□□□ -1.63
PHC3-213ENST00000491258 KCTD20Q7Z5Y7 419 aa4.87□□□□□ -1.63
PHC3-213ENST00000491258 DAAM2Q86T65 1068 aa4.87□□□□□ -1.63
PHC3-213ENST00000491258 DCP1BQ8IZD4 617 aaKnown RBP4.87□□□□□ -1.63
PHC3-213ENST00000491258 NGDNQ8NEJ9 315 aaKnown RBP4.87□□□□□ -1.63
PHC3-213ENST00000491258 HIC2Q96JB3 615 aa4.87□□□□□ -1.63
PHC3-213ENST00000491258 NUP88Q99567 741 aaPredicted RBP4.87□□□□□ -1.63
PHC3-213ENST00000491258 TRIM5Q9C035 493 aa4.87□□□□□ -1.63
PHC3-213ENST00000491258 EXOC5O00471 708 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 FYB1O15117 783 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 CD3EAPO15446 510 aaKnown RBP4.86□□□□□ -1.63
PHC3-213ENST00000491258 CD63P08962 238 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 PF4V1P10720 104 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 HGFP14210 728 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 HTR1BP28222 390 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 ITGA8P53708 1063 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 KPNB1Q14974 876 aaKnown RBP4.86□□□□□ -1.63
PHC3-213ENST00000491258 INSCQ1MX18 579 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 PRTGQ2VWP7 1150 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 UBE2Q1Q7Z7E8 422 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 C12orf76Q8N812 135 aaPredicted RBP4.86□□□□□ -1.63
PHC3-213ENST00000491258 ASB5Q8WWX0 329 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms