RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 CCP110O43303 1012 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 KRT86O43790 486 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 HSF2BPO75031 334 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 FGF19O95750 216 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 LTFP02788 710 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 KRT3P12035 628 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 PPP3CCP48454 512 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 TAF10Q12962 218 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 MAMLD1Q13495 774 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 COL19A1Q14993 1142 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 PPP1R15BQ5SWA1 713 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 BEND5Q7L4P6 421 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 PIWIL1Q96J94 861 aaKnown RBP19.54■□□□□ 0.72
MCF2L-230ENST00000491028 CALR3Q96L12 384 aaKnown RBP19.54■□□□□ 0.72
MCF2L-230ENST00000491028 ASAH2Q9NR71 780 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 TLR8Q9NR97 1041 aaKnown RBP19.54■□□□□ 0.72
MCF2L-230ENST00000491028 METTL5Q9NRN9 209 aaKnown RBP19.54■□□□□ 0.72
MCF2L-230ENST00000491028 OBSL1O75147 1896 aa19.54■□□□□ 0.72
MCF2L-230ENST00000491028 CCDC195A0A1B0GUA6 201 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 RCCD1A6NED2 376 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 DAB1O75553 588 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 MTA2O94776 668 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 ZDHHC11BP0C7U3 371 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 HOXB8P17481 243 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-230ENST00000491028 PTPN2P17706 415 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 EPHA5P54756 1037 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 YWHAGP61981 247 aaKnown RBP eCLIP19.53■□□□□ 0.72
MCF2L-230ENST00000491028 RBM10P98175 930 aaKnown RBP19.53■□□□□ 0.72
MCF2L-230ENST00000491028 CTC1Q2NKJ3 1217 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 PABPC1LQ4VXU2 614 aaKnown RBP19.53■□□□□ 0.72
MCF2L-230ENST00000491028 ANKRD54Q6NXT1 300 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 PHLDB2Q86SQ0 1253 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 TMC8Q8IU68 726 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 FAM149B1Q96BN6 582 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 ZNF707Q96C28 371 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-230ENST00000491028 NUP85Q9BW27 656 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 LACRTQ9GZZ8 138 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 POPDC2Q9HBU9 364 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 GMIPQ9P107 970 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 CTTNBP2NLQ9P2B4 639 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 TMEM59LQ9UK28 342 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 ZKSCAN5Q9Y2L8 839 aa19.53■□□□□ 0.72
MCF2L-230ENST00000491028 YJEFN3A6XGL0 299 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 E7ENQ6 273 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 LINC01565O15544 149 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 CDC25CP30307 473 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 HADHBP55084 474 aaKnown RBP19.52■□□□□ 0.72
MCF2L-230ENST00000491028 YWHAZP63104 245 aaKnown RBP19.52■□□□□ 0.72
MCF2L-230ENST00000491028 SNX30Q5VWJ9 437 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 DCUN1D2Q6PH85 259 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 Q7L0L9 218 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 FEZF2Q8TBJ5 459 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 ZNF564Q8TBZ8 553 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-230ENST00000491028 MYLIPQ8WY64 445 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 KHSRPQ92945 711 aaKnown RBP eCLIP19.52■□□□□ 0.72
MCF2L-230ENST00000491028 PABPC5Q96DU9 382 aaKnown RBP19.52■□□□□ 0.72
MCF2L-230ENST00000491028 SLC2A13Q96QE2 648 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 GCNAQ96QF7 691 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 CDX2Q99626 313 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-230ENST00000491028 LRRC3Q9BY71 257 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 IL21Q9HBE4 155 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 ZNF334Q9HCZ1 680 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-230ENST00000491028 KCND1Q9NSA2 647 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 ABCC13Q9NSE7 274 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 CLIC5Q9NZA1 410 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 TRPM5Q9NZQ8 1165 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 LCMT1Q9UIC8 334 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 TFR2Q9UP52 801 aa19.52■□□□□ 0.72
MCF2L-230ENST00000491028 PRRC2BQ5JSZ5 2229 aaKnown RBP19.52■□□□□ 0.71
MCF2L-230ENST00000491028 DENND4CQ5VZ89 1909 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 A0A1W2PQH9 124 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 GOLGA6L9A6NEM1 432 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 F11P03951 625 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 ARHGAP29Q52LW3 1261 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 BSPRYQ5W0U4 402 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 BTBD8Q5XKL5 378 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 SCD5Q86SK9 330 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 DEFB123Q8N688 67 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 SLC35G2Q8TBE7 412 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 KIAA1524Q8TCG1 905 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 FNIP1Q8TF40 1166 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 SMG7Q92540 1137 aaKnown RBP19.51■□□□□ 0.71
MCF2L-230ENST00000491028 NDRG1Q92597 394 aaKnown RBP19.51■□□□□ 0.71
MCF2L-230ENST00000491028 MCEEQ96PE7 176 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 CORO1BQ9BR76 489 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 PIDD1Q9HB75 910 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 NMUR1Q9HB89 426 aa19.51■□□□□ 0.71
MCF2L-230ENST00000491028 C2orf16Q68DN1 1984 aa19.5■□□□□ 0.71
MCF2L-230ENST00000491028 TMEM191CA6NGB0 347 aa19.5■□□□□ 0.71
MCF2L-230ENST00000491028 TADA3O75528 432 aa19.5■□□□□ 0.71
MCF2L-230ENST00000491028 TUBP50607 506 aa19.5■□□□□ 0.71
MCF2L-230ENST00000491028 TAF5Q15542 800 aa19.5■□□□□ 0.71
MCF2L-230ENST00000491028 IFI16Q16666 785 aaKnown RBP19.5■□□□□ 0.71
MCF2L-230ENST00000491028 RARS2Q5T160 578 aaKnown RBP19.5■□□□□ 0.71
MCF2L-230ENST00000491028 HFE2Q6ZVN8 426 aa19.5■□□□□ 0.71
MCF2L-230ENST00000491028 PDZD4Q76G19 769 aaPredicted RBP19.5■□□□□ 0.71
MCF2L-230ENST00000491028 HS6ST3Q8IZP7 471 aa19.5■□□□□ 0.71
MCF2L-230ENST00000491028 CCAR2Q8N163 923 aaKnown RBP19.5■□□□□ 0.71
MCF2L-230ENST00000491028 MICALL1Q8N3F8 863 aa19.5■□□□□ 0.71
MCF2L-230ENST00000491028 ZNF276Q8N554 614 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms