RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 MMEL1Q495T6 779 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 TEX44Q53QW1 395 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 PPP1R2P3Q6NXS1 205 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 GDPD5Q8WTR4 605 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 RPAP3Q9H6T3 665 aaPredicted RBP20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 COL20A1Q9P218 1284 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 MRPL11Q9Y3B7 192 aaKnown RBP20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 HNRNPRO43390 633 aaKnown RBP20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 PLA2G6O60733 806 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 ATP5BP06576 529 aaKnown RBP20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 RGS2P41220 211 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 HMGCS2P54868 508 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 SLC25A3Q00325 362 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 CUL2Q13617 745 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 ITGA9Q13797 1035 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 UGCGQ16739 394 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 FAM160B2Q86V87 743 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 CRLF3Q8IUI8 442 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 RBM12BQ8IXT5 1001 aaKnown RBP20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 SLC26A7Q8TE54 656 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 SMYD3Q9H7B4 428 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 KMT5AQ9NQR1 393 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 SIRPGQ9P1W8 387 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 HSFX1Q9UBD0 423 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 AGTPBP1Q9UPW5 1226 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 TMCC1O94876 653 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 C6orf222P0C671 652 aaPredicted RBP20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 CHN2P52757 468 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 YWHAGP61981 247 aaKnown RBP eCLIP20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 BASP1P80723 227 aaKnown RBP20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 SH2D4BQ5SQS7 431 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 MAP3K21Q5TCX8 1036 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 TTC39BQ5VTQ0 682 aaPredicted RBP20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 DCAF15Q66K64 600 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 PLA2G4FQ68DD2 849 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 DCUN1D2Q6PH85 259 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 DGCR14Q96DF8 476 aaKnown RBP20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 PTTG2Q9NZH5 202 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 HBS1LQ9Y450 684 aaKnown RBP20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 PHIPQ8WWQ0 1821 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 C3orf70A6NLC5 250 aaPredicted RBP20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 WDR46O15213 610 aaKnown RBP20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 USP2O75604 605 aaPredicted RBP20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 FAM155BO75949 473 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 AOC1P19801 751 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 BACE1P56817 501 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 XKR9Q5GH70 373 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 DNAJC24Q6P3W2 148 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 UGT2A3Q6UWM9 527 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 PIP4K2CQ8TBX8 421 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 CCPG1Q9ULG6 757 aa20.1■□□□□ 0.81
SNAPC3-206ENST00000490969 HNRNPDLO14979 420 aaKnown RBP20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 ZSCAN9O15535 394 aaPredicted RBP20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 ENPEPQ07075 957 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 CCNIQ14094 377 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 ZACNQ401N2 412 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 ANKRD20A4Q4UJ75 823 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 TDRD10Q5VZ19 366 aaKnown RBP20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 SLC26A11Q86WA9 606 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 NUDCD3Q8IVD9 361 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 UNC45BQ8IWX7 931 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 EBF4Q9BQW3 602 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 TXNDC9O14530 226 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 CYB561D2O14569 222 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 AP1G1O43747 822 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 CCNT2O60583 730 aaKnown RBP20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 CST8O60676 142 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 PEX10O60683 326 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 PGM3O95394 542 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 WEE2P0C1S8 567 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 MRPS5P82675 430 aaKnown RBP20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 DEUP1Q05D60 604 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 MOB2Q70IA6 237 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 NCAPG2Q86XI2 1143 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 ZNF280CQ8ND82 737 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 CLEC4DQ8WXI8 215 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 BSNDQ8WZ55 320 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 C20orf27Q9GZN8 174 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 APOBEC3GQ9HC16 384 aaKnown RBP20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 GMEB1Q9Y692 573 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 RPS6KL1Q9Y6S9 549 aa20.09■□□□□ 0.81
SNAPC3-206ENST00000490969 TCRBV5S1A1TA0A578 114 aa20.08■□□□□ 0.81
SNAPC3-206ENST00000490969 SDR42E2A6NKP2 422 aa20.08■□□□□ 0.81
SNAPC3-206ENST00000490969 TNNI1P19237 187 aa20.08■□□□□ 0.81
SNAPC3-206ENST00000490969 RPL26P61254 145 aaKnown RBP20.08■□□□□ 0.81
SNAPC3-206ENST00000490969 NCOA4Q13772 614 aa20.08■□□□□ 0.81
SNAPC3-206ENST00000490969 PIGHQ14442 188 aaPredicted RBP20.08■□□□□ 0.81
SNAPC3-206ENST00000490969 TRIP10Q15642 601 aa20.08■□□□□ 0.81
SNAPC3-206ENST00000490969 TTC13Q8NBP0 860 aa20.08■□□□□ 0.81
SNAPC3-206ENST00000490969 LPAR1Q92633 364 aa20.08■□□□□ 0.81
SNAPC3-206ENST00000490969 ATG4CQ96DT6 458 aa20.08■□□□□ 0.81
SNAPC3-206ENST00000490969 FRMD8P1Q9BZ68 369 aaPredicted RBP20.08■□□□□ 0.81
SNAPC3-206ENST00000490969 TEX264Q9Y6I9 313 aa20.08■□□□□ 0.81
SNAPC3-206ENST00000490969 C15orf38-AP3S2A0A0A6YYH1 394 aa20.08■□□□□ 0.8
SNAPC3-206ENST00000490969 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.08■□□□□ 0.8
SNAPC3-206ENST00000490969 SNNO75324 88 aaPredicted RBP20.08■□□□□ 0.8
SNAPC3-206ENST00000490969 ICAM1P05362 532 aa20.08■□□□□ 0.8
SNAPC3-206ENST00000490969 CALB1P05937 261 aa20.08■□□□□ 0.8
SNAPC3-206ENST00000490969 SMIM18P0DKX4 95 aa20.08■□□□□ 0.8
SNAPC3-206ENST00000490969 EPHB1P54762 984 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms