RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 PRR23AA6NEV1 266 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 O00370 1275 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 ERCC5P28715 1186 aaPredicted RBP16.03■□□□□ 0.16
COL27A1-206ENST00000490831 PSEN1P49768 467 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 BCAT1P54687 386 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 CSTF1Q05048 431 aaKnown RBP16.03■□□□□ 0.16
COL27A1-206ENST00000490831 GRSF1Q12849 480 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL27A1-206ENST00000490831 GAB4Q2WGN9 574 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 PKDCCQ504Y2 493 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 ZC3H14Q6PJT7 736 aaKnown RBP16.03■□□□□ 0.16
COL27A1-206ENST00000490831 Q6ZS52 159 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 SCD5Q86SK9 330 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 PIGZQ86VD9 579 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 PPM1KQ8N3J5 372 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 ZBTB44Q8NCP5 570 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 KAT5Q92993 513 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 NKD2Q969F2 451 aaPredicted RBP16.03■□□□□ 0.16
COL27A1-206ENST00000490831 EXOC4Q96A65 974 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 JAKMIP2Q96AA8 810 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 OTUB2Q96DC9 234 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 GBP4Q96PP9 640 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 NMUR1Q9HB89 426 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL27A1-206ENST00000490831 CLIC5Q9NZA1 410 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 TBC1D14Q9P2M4 693 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 TSPAN16Q9UKR8 245 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 CNTN6Q9UQ52 1028 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 PCDHGA2Q9Y5H1 932 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 MYO16Q9Y6X6 1858 aa16.03■□□□□ 0.16
COL27A1-206ENST00000490831 A0A1W2PQH9 124 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 XPO1O14980 1071 aaKnown RBP16.02■□□□□ 0.16
COL27A1-206ENST00000490831 GREM1O60565 184 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 GFRA3O60609 400 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 DRD1P21728 446 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 GALK1P51570 392 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 ZNF132P52740 706 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 SLC8A3P57103 927 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 BST2Q10589 180 aaKnown RBP16.02■□□□□ 0.16
COL27A1-206ENST00000490831 GOLGA7BQ2TAP0 167 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 DPCR1Q3MIW9 517 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 CT47A1Q5JQC4 288 aaPredicted RBP16.02■□□□□ 0.16
COL27A1-206ENST00000490831 SMYD5Q6GMV2 418 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 PM20D1Q6GTS8 502 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 TMEM270Q6UE05 265 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 LCLAT1Q6UWP7 414 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 ASCL5Q7RTU5 278 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 ARHGEF19Q8IW93 802 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 TTC16Q8NEE8 873 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 IPO9Q96P70 1041 aaKnown RBP16.02■□□□□ 0.16
COL27A1-206ENST00000490831 P2RY13Q9BPV8 354 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 KLF16Q9BXK1 252 aaPredicted RBP16.02■□□□□ 0.16
COL27A1-206ENST00000490831 INTS2Q9H0H0 1204 aaKnown RBP16.02■□□□□ 0.16
COL27A1-206ENST00000490831 THAP9Q9H5L6 903 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 FBRSL1Q9HCM7 1045 aaKnown RBP16.02■□□□□ 0.16
COL27A1-206ENST00000490831 ZSCAN32Q9NX65 697 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 R4GN57 208 aa16.02■□□□□ 0.16
COL27A1-206ENST00000490831 RIF1Q5UIP0 2472 aaKnown RBP16.02■□□□□ 0.15
COL27A1-206ENST00000490831 GTPBP10A4D1E9 387 aaKnown RBP16.01■□□□□ 0.15
COL27A1-206ENST00000490831 RNF225M0QZC1 329 aaPredicted RBP16.01■□□□□ 0.15
COL27A1-206ENST00000490831 LILRB5O75023 590 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 TBX18O95935 607 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 CYP17A1P05093 508 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 RARGP13631 454 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 HOXA6P31267 233 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 ATP5C1P36542 298 aaKnown RBP16.01■□□□□ 0.15
COL27A1-206ENST00000490831 PLA2G4AP47712 749 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 CXCL12P48061 93 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 SATB1Q01826 763 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 PDE4CQ08493 712 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 PPP2R5DQ14738 602 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 DHCR24Q15392 516 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 FBXO43Q4G163 708 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 NAIF1Q69YI7 327 aaPredicted RBP16.01■□□□□ 0.15
COL27A1-206ENST00000490831 RHBDF2Q6PJF5 856 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 RBM43Q6ZSC3 357 aaKnown RBP16.01■□□□□ 0.15
COL27A1-206ENST00000490831 HTR3DQ70Z44 454 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 SCML4Q8N228 414 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 KCTD13Q8WZ19 329 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 TFAP2BQ92481 460 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 CD101Q93033 1021 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 KREMEN1Q96MU8 473 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 HESX1Q9UBX0 185 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 DACH1Q9UI36 760 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 PCDHB4Q9Y5E5 795 aa16.01■□□□□ 0.15
COL27A1-206ENST00000490831 CHURC1-FNTBB4DL54 471 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 K7ESF4 209 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 TULP2O00295 520 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 EGFP01133 1207 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 SETSIPP0DME0 302 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 CD19P15391 556 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 OPRD1P41143 372 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 EIF2DP41214 584 aaKnown RBP16■□□□□ 0.15
COL27A1-206ENST00000490831 NRLP54845 237 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 STILQ15468 1287 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 CNGA2Q16280 664 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 TSSK4Q6SA08 328 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 RRAGAQ7L523 313 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 BHLHA9Q7RTU4 235 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 TADA2BQ86TJ2 420 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 ARHGAP18Q8N392 663 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms