RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 PIGKQ92643 395 aa18.83■□□□□ 0.61
YIPF3-208ENST00000490447 ZFRQ96KR1 1074 aaKnown RBP18.83■□□□□ 0.61
YIPF3-208ENST00000490447 FBXO44Q9H4M3 255 aa18.83■□□□□ 0.61
YIPF3-208ENST00000490447 GMIPQ9P107 970 aa18.83■□□□□ 0.61
YIPF3-208ENST00000490447 DEC1Q9P2X7 70 aa18.83■□□□□ 0.61
YIPF3-208ENST00000490447 A0A0A0MRY4 1105 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 TCRBV21S2A2A0A5A6 115 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 TNFRSF10BO14763 440 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 C4BPAP04003 597 aaKnown RBP18.82■□□□□ 0.6
YIPF3-208ENST00000490447 CCDC130P13994 396 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 KIR2DL1P43626 348 aaPredicted RBP18.82■□□□□ 0.6
YIPF3-208ENST00000490447 CLDN10P78369 228 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 MESP2Q0VG99 397 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 EMC10Q5UCC4 262 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 BBS7Q8IWZ6 715 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 FUKQ8N0W3 1084 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 OLIG1Q8TAK6 271 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 SLC2A14Q8TDB8 520 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 HMGB4Q8WW32 186 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 TAF4BQ92750 862 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 SNX21Q969T3 373 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 ELMO3Q96BJ8 720 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 TLR8Q9NR97 1041 aaKnown RBP18.82■□□□□ 0.6
YIPF3-208ENST00000490447 SPHK2Q9NRA0 654 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 SERTAD1Q9UHV2 236 aa18.82■□□□□ 0.6
YIPF3-208ENST00000490447 HOXC11O43248 304 aaPredicted RBP18.81■□□□□ 0.6
YIPF3-208ENST00000490447 TLR5O60602 858 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 VNN1O95497 513 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 RPN1P04843 607 aaKnown RBP18.81■□□□□ 0.6
YIPF3-208ENST00000490447 SLFN14P0C7P3 912 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 P2RY2P41231 377 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 MAP3K7CLP57077 242 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 SHC2P98077 582 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 GOLGA8FQ08AF8 430 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 GOLGA8DPQ0D2H9 430 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 STK4Q13043 487 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 PAQR9Q6ZVX9 377 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 SLC9A9Q8IVB4 645 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 ZNF513Q8N8E2 541 aaPredicted RBP18.81■□□□□ 0.6
YIPF3-208ENST00000490447 RLN3Q8WXF3 142 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 NUSAP1Q9BXS6 441 aaKnown RBP18.81■□□□□ 0.6
YIPF3-208ENST00000490447 IMPG2Q9BZV3 1241 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 SDCBP2Q9H190 292 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 ZDHHC4Q9NPG8 344 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 IL37Q9NZH6 218 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 FRMD4BQ9Y2L6 1034 aa18.81■□□□□ 0.6
YIPF3-208ENST00000490447 CNOT1A5YKK6 2376 aaKnown RBP18.81■□□□□ 0.6
YIPF3-208ENST00000490447 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 FAM92AA1XBS5 289 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 PATE3B3GLJ2 98 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 PDXKO00764 312 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 TULP3O75386 442 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 NR3C1P04150 777 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 ZDHHC11BP0C7U3 371 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 FAM200BP0CF97 657 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 HNRNPLP14866 589 aaKnown RBP eCLIP18.8■□□□□ 0.6
YIPF3-208ENST00000490447 PIK3CAP42336 1068 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 NDST1P52848 882 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 DLG4P78352 724 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 LMAN2Q12907 356 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 ORC1Q13415 861 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 KMT5BQ4FZB7 885 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 C10orf76Q5T2E6 689 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 CEP135Q66GS9 1140 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 ARMCX6Q7L4S7 300 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 UNC93AQ86WB7 457 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 TMEFF1Q8IYR6 380 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 KIAA0895Q8NCT3 520 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 KCNV2Q8TDN2 545 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 PAGE5Q96GU1 130 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 SMOQ99835 787 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 DUSP9Q99956 384 aaKnown RBP18.8■□□□□ 0.6
YIPF3-208ENST00000490447 FAM49BQ9NUQ9 324 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 DMAC2Q9NW81 257 aa18.8■□□□□ 0.6
YIPF3-208ENST00000490447 LSM7Q9UK45 103 aaKnown RBP18.8■□□□□ 0.6
YIPF3-208ENST00000490447 ZBTB24O43167 697 aaPredicted RBP18.79■□□□□ 0.6
YIPF3-208ENST00000490447 CALUO43852 315 aaPredicted RBP18.79■□□□□ 0.6
YIPF3-208ENST00000490447 KLRC4O43908 158 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 ADAM23O75077 832 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 KIF20AO95235 890 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 DPP6P42658 865 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 DNM1Q05193 864 aaKnown RBP18.79■□□□□ 0.6
YIPF3-208ENST00000490447 ZNF252P-AS1Q0IIN9 211 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 ZACNQ401N2 412 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 TRIM61Q5EBN2 209 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 SPDYCQ5MJ68 293 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 SH3PXD2AQ5TCZ1 1133 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 ETFBKMTQ8IXQ9 262 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 PHTF2Q8N3S3 785 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 TERB1Q8NA31 727 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 TMEM174Q8WUU8 243 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 XPO6Q96QU8 1125 aaKnown RBP18.79■□□□□ 0.6
YIPF3-208ENST00000490447 DNAI2Q9GZS0 605 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 CSNK1G1Q9HCP0 422 aa18.79■□□□□ 0.6
YIPF3-208ENST00000490447 EVLQ9UI08 416 aaPredicted RBP18.79■□□□□ 0.6
YIPF3-208ENST00000490447 IKBKBO14920 756 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 ACTN4O43707 911 aaKnown RBP18.78■□□□□ 0.6
YIPF3-208ENST00000490447 BEST1O76090 585 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 MYL1P05976 194 aa18.78■□□□□ 0.6
YIPF3-208ENST00000490447 HOXB2P14652 356 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms