RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 TPTEP56180 551 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 ZXDAP98168 799 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 GALNT1Q10472 559 aaPredicted RBP4.61□□□□□ -1.67
CD46-216ENST00000490278 PTK2BQ14289 1009 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 ZNF169Q14929 603 aaPredicted RBP4.61□□□□□ -1.67
CD46-216ENST00000490278 CLCA4Q14CN2 919 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 CLEC9AQ6UXN8 241 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 FSTL5Q8N475 847 aaPredicted RBP4.61□□□□□ -1.67
CD46-216ENST00000490278 LRRC71Q8N4P6 559 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 AMER2Q8N7J2 671 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 C11orf44Q8N8P7 122 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 FAM71BQ8TC56 605 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 GRAMD1AQ96CP6 724 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 PDLIM2Q96JY6 352 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 HAPLN3Q96S86 360 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 TTPALQ9BTX7 342 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 SERTAD4Q9NUC0 356 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 FOXJ2Q9P0K8 574 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 NKX1-2Q9UD57 310 aaPredicted RBP4.61□□□□□ -1.67
CD46-216ENST00000490278 STEAP1Q9UHE8 339 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 CCNL1Q9UK58 526 aaPredicted RBP4.61□□□□□ -1.67
CD46-216ENST00000490278 PACSIN3Q9UKS6 424 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 GABRQQ9UN88 632 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 SLC27A6Q9Y2P4 619 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 DTNAQ9Y4J8 743 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 SALL3Q9BXA9 1300 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 COL15A1P39059 1388 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 AQP12BA6NM10 295 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 LINC00473A8K010 186 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 SYT5O00445 386 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 ZSCAN9O15535 394 aaPredicted RBP4.6□□□□□ -1.67
CD46-216ENST00000490278 PMPCBO75439 489 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 TTLL1O95922 423 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 LMNAP02545 664 aaKnown RBP4.6□□□□□ -1.67
CD46-216ENST00000490278 GCP02774 474 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 DLDP09622 509 aaKnown RBP4.6□□□□□ -1.67
CD46-216ENST00000490278 SRGAP2BP0DMP2 458 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 NPPBP16860 134 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 NDUFB7P17568 137 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 PCSK6P29122 969 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 GKP32189 559 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 CHKAP35790 457 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 ACVRL1P37023 503 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 FHL3Q13643 280 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 DHX8Q14562 1220 aaKnown RBP4.6□□□□□ -1.67
CD46-216ENST00000490278 PRR16Q569H4 304 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 ANO1Q5XXA6 986 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 ANKRD16Q6P6B7 361 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 PARS2Q7L3T8 475 aaKnown RBP4.6□□□□□ -1.67
CD46-216ENST00000490278 WDR53Q7Z5U6 358 aaPredicted RBP4.6□□□□□ -1.67
CD46-216ENST00000490278 GATAD2AQ86YP4 633 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 RASGRP3Q8IV61 690 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 ATG16L2Q8NAA4 619 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 RP9Q8TA86 221 aaKnown RBP4.6□□□□□ -1.67
CD46-216ENST00000490278 SUN3Q8TAQ9 357 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 STYXQ8WUJ0 223 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 RMDN3Q96TC7 470 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 PRPF18Q99633 342 aaKnown RBP4.6□□□□□ -1.67
CD46-216ENST00000490278 PPCSQ9HAB8 311 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 HELLSQ9NRZ9 838 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 LRFN1Q9P244 771 aa4.6□□□□□ -1.67
CD46-216ENST00000490278 GCOM1H8Y6P7 765 aaPredicted RBP4.59□□□□□ -1.67
CD46-216ENST00000490278 M0R3H8 397 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 KIAA0355O15063 1070 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 RAMP2O60895 175 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 NBNO60934 754 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 RHOBTB3O94955 611 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 TJP3O95049 919 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 EBLN1P0CF75 366 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 JUPP14923 745 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 YY1P25490 414 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 CYP2C18P33260 490 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 HTR7P34969 479 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 SERPINF1P36955 418 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 PLA2G5P39877 138 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 GDF5P43026 501 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 SUMO2P61956 95 aaKnown RBP4.59□□□□□ -1.67
CD46-216ENST00000490278 CYP1B1Q16678 543 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 ST3GAL2Q16842 350 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 TRIM71Q2Q1W2 868 aaKnown RBP4.59□□□□□ -1.67
CD46-216ENST00000490278 DPY19L3Q6ZPD9 716 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 Q6ZWC4 215 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 MRGPRGQ86SM5 289 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 CACNA2D3Q8IZS8 1091 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 METTL25Q8N6Q8 603 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 SIRT6Q8N6T7 355 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 LTV1Q96GA3 475 aaPredicted RBP4.59□□□□□ -1.67
CD46-216ENST00000490278 PRR25Q96S07 402 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 WDR24Q96S15 920 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 HERPUD2Q9BSE4 406 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 DACT1Q9NYF0 836 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 DLL3Q9NYJ7 618 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 ST3GAL5Q9UNP4 418 aa4.59□□□□□ -1.67
CD46-216ENST00000490278 A8MVJ9 347 aa4.58□□□□□ -1.68
CD46-216ENST00000490278 AP4M1O00189 453 aa4.58□□□□□ -1.68
CD46-216ENST00000490278 QSOX1O00391 747 aa4.58□□□□□ -1.68
CD46-216ENST00000490278 ACKR2O00590 384 aa4.58□□□□□ -1.68
CD46-216ENST00000490278 CES2O00748 559 aa4.58□□□□□ -1.68
CD46-216ENST00000490278 SPRY2O43597 315 aa4.58□□□□□ -1.68
CD46-216ENST00000490278 ASNA1O43681 348 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms