RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 GAS2L3Q86XJ1 694 aa8.27□□□□□ -1.09
SSR1-210ENST00000489567 MFSD6LQ8IWD5 586 aa8.27□□□□□ -1.09
SSR1-210ENST00000489567 NEK11Q8NG66 645 aa8.27□□□□□ -1.09
SSR1-210ENST00000489567 CLEC4CQ8WTT0 213 aa8.27□□□□□ -1.09
SSR1-210ENST00000489567 KCTD13Q8WZ19 329 aa8.27□□□□□ -1.09
SSR1-210ENST00000489567 OVCA2Q8WZ82 227 aa8.27□□□□□ -1.09
SSR1-210ENST00000489567 ASIC4Q96FT7 647 aa8.27□□□□□ -1.09
SSR1-210ENST00000489567 ZFYVE19Q96K21 471 aa8.27□□□□□ -1.09
SSR1-210ENST00000489567 ZFRQ96KR1 1074 aaKnown RBP8.27□□□□□ -1.09
SSR1-210ENST00000489567 TDP1Q9NUW8 608 aa8.27□□□□□ -1.09
SSR1-210ENST00000489567 SMPD4Q9NXE4 827 aa8.27□□□□□ -1.09
SSR1-210ENST00000489567 IFNKQ9P0W0 207 aa8.27□□□□□ -1.09
SSR1-210ENST00000489567 NUP210Q8TEM1 1887 aaPredicted RBP8.26□□□□□ -1.09
SSR1-210ENST00000489567 MYO16Q9Y6X6 1858 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 NCOR1O75376 2440 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 TRAV19A0A0A6YYK7 116 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 YJEFN3A6XGL0 299 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 E7ENQ6 273 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 ARNTLO00327 626 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 SCAMP3O14828 347 aaKnown RBP8.26□□□□□ -1.09
SSR1-210ENST00000489567 MDM4O15151 490 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 MED7O43513 233 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 ZBED1O96006 694 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 SRFP11831 508 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 ALADP13716 330 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 PSMC3P17980 439 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 SOX5P35711 763 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 PBX1P40424 430 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 UBASH3AP57075 661 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 TPM4P67936 248 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 FCHO2Q0JRZ9 810 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 FILIP1LQ4L180 1135 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 TAF3Q5VWG9 929 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 PM20D1Q6GTS8 502 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 HFE2Q6ZVN8 426 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 UBALD2Q8IYN6 164 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 TTC16Q8NEE8 873 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 PDZD8Q8NEN9 1154 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 EPS8L1Q8TE68 723 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 SLC20A1Q8WUM9 679 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 BAP1Q92560 729 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 ZNF592Q92610 1267 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 WBP2Q969T9 261 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 CCDC97Q96F63 343 aaPredicted RBP8.26□□□□□ -1.09
SSR1-210ENST00000489567 TRMT61BQ9BVS5 477 aaKnown RBP8.26□□□□□ -1.09
SSR1-210ENST00000489567 TTYH3Q9C0H2 523 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 LRRC4Q9HBW1 653 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 CYLDQ9NQC7 956 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 TLR8Q9NR97 1041 aaKnown RBP8.26□□□□□ -1.09
SSR1-210ENST00000489567 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.26□□□□□ -1.09
SSR1-210ENST00000489567 NAGPAQ9UK23 515 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 NOCTQ9UK39 431 aaKnown RBP8.26□□□□□ -1.09
SSR1-210ENST00000489567 PCDHGC3Q9UN70 934 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 BDP1A6H8Y1 2624 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 A0A1W2PQC6 194 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 KRBA1A5PL33 1030 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 SOBPA7XYQ1 873 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 AP5Z1O43299 807 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 TLR5O60602 858 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 PDGFBP01127 241 aaPredicted RBP8.26□□□□□ -1.09
SSR1-210ENST00000489567 MMEP08473 750 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 CHRNB2P17787 502 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 GDI1P31150 447 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 RPL34P49207 117 aaKnown RBP8.26□□□□□ -1.09
SSR1-210ENST00000489567 TUBP50607 506 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 DAOAP59103 153 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 SLC7A9P82251 487 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 TNK2Q07912 1038 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 SIGLEC14Q08ET2 396 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 PDCLQ13371 301 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 ZNF77Q15935 545 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 HECTD3Q5T447 861 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 E4F1Q66K89 784 aaPredicted RBP8.26□□□□□ -1.09
SSR1-210ENST00000489567 TRIM67Q6ZTA4 783 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 SCUBE3Q8IX30 993 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 CELF5Q8N6W0 485 aaKnown RBP8.26□□□□□ -1.09
SSR1-210ENST00000489567 C1orf131Q8NDD1 294 aaKnown RBP8.26□□□□□ -1.09
SSR1-210ENST00000489567 BPIFB1Q8TDL5 484 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 SH3RF2Q8TEC5 729 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 PIWIL1Q96J94 861 aaKnown RBP8.26□□□□□ -1.09
SSR1-210ENST00000489567 HSFY1Q96LI6 401 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 SPAG5Q96R06 1193 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 CPXM1Q96SM3 734 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 SLC4A5Q9BY07 1137 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 XPO4Q9C0E2 1151 aaKnown RBP8.26□□□□□ -1.09
SSR1-210ENST00000489567 MIS12Q9H081 205 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 RBSNQ9H1K0 784 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 SLC2A4RGQ9NR83 387 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 ST7Q9NRC1 585 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 GKN1Q9NS71 199 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 ZMYM5Q9UJ78 669 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 ARHGAP26Q9UNA1 814 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 CPQQ9Y646 472 aa8.26□□□□□ -1.09
SSR1-210ENST00000489567 TECTAO75443 2155 aa8.25□□□□□ -1.09
SSR1-210ENST00000489567 OTOL1A6NHN0 477 aaPredicted RBP8.25□□□□□ -1.09
SSR1-210ENST00000489567 SHISA7A6NL88 538 aa8.25□□□□□ -1.09
SSR1-210ENST00000489567 E5RJQ4 531 aa8.25□□□□□ -1.09
SSR1-210ENST00000489567 LEFTY2O00292 366 aa8.25□□□□□ -1.09
SSR1-210ENST00000489567 DPYSL4O14531 572 aa8.25□□□□□ -1.09
SSR1-210ENST00000489567 PAPSS1O43252 624 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms